Pairwise Alignments

Query, 444 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

Subject, 441 a.a., Superfamily II DNA and RNA helicases from Pseudomonas stutzeri RCH2

 Score =  636 bits (1640), Expect = 0.0
 Identities = 322/444 (72%), Positives = 366/444 (82%), Gaps = 4/444 (0%)

Query: 1   MTFATLGLIEPLLRALETLGYQTPTPVQAQAIPAVLAGRDLMAAAQTGTGKTAGFAVPLL 60
           MTFA+LGLI+PLLR LETL Y+ PTPVQ +AIPAVL GRDLMAAAQTGTGKTAGFA+PLL
Sbjct: 1   MTFASLGLIDPLLRTLETLDYRKPTPVQIEAIPAVLKGRDLMAAAQTGTGKTAGFALPLL 60

Query: 61  QLLTMEGPKVAANSARALILCPTRELAEQVHASVAEYAQNLPLTTYAVYGGVSINPQMMK 120
           Q LTMEG KVA+NS RAL+L PTRELAEQVH S   Y QNLPL TYAVYGGVSINPQMM 
Sbjct: 61  QRLTMEGAKVASNSVRALVLVPTRELAEQVHESFRVYGQNLPLRTYAVYGGVSINPQMMA 120

Query: 121 LRKGVDILVATPGRLIDLFRQNALKLNQLQTLVLDEADRMLDLGFSEELANIYRMLPKKR 180
           LRKG+D+LVATPGRL+DL+RQNA+  NQLQ LVLDEADRMLDLGF++EL  ++  LPKKR
Sbjct: 121 LRKGIDVLVATPGRLLDLYRQNAVGFNQLQALVLDEADRMLDLGFADELDQLFSALPKKR 180

Query: 181 QTLLFSATFSDDIRLLAGQMLNDPLSIEVSPRNVAANTVKQWVVPVDKKRKPELFVHLMR 240
           QTLLFSATFS+ IR +A ++L DPLS+EVSPRN AA TVKQW+VPVDKKRK ELF+HL+ 
Sbjct: 181 QTLLFSATFSEAIRQMARELLRDPLSVEVSPRNAAAKTVKQWLVPVDKKRKSELFLHLLA 240

Query: 241 KGRWKQVLVFAKTRNGVDALVDKLQGLGINADGIHGDKPQATRQRALDRFKSSEVQILVA 300
           + RW QVLVF KTR GVD LVD+LQ  GI++D IHGDKPQA+R RAL+RFK+ EVQ+LVA
Sbjct: 241 EKRWGQVLVFVKTRKGVDQLVDELQAAGISSDAIHGDKPQASRLRALERFKAGEVQVLVA 300

Query: 301 TDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGNTGEAISLVCADEVNMLSAIE 360
           TDVAARGLDI DLP VVNFDLPIVAEDY+HRIGRTGRAG TGEA+SLV ADEV+ L+AIE
Sbjct: 301 TDVAARGLDIHDLPQVVNFDLPIVAEDYVHRIGRTGRAGATGEAVSLVSADEVDQLAAIE 360

Query: 361 MLTRQTLTRHMEQDFEPEHRVPDTDASGQVVKKPKKPKKPKSSGGGGKRNLGKWVDSGEV 420
            L  Q L RH E  F P+HRVP T   GQ++KKPKKPKKPK +GG GK +LG W D  E 
Sbjct: 361 TLINQVLPRHDELGFVPDHRVPTTTLGGQIIKKPKKPKKPKDAGGKGKIHLGNWFDESE- 419

Query: 421 APAEPSIKPVRKVPVFNTGPRKKK 444
              +P+ KP+RKVP    G   KK
Sbjct: 420 ---KPNAKPIRKVPSLGGGKPAKK 440