Pairwise Alignments

Query, 444 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

Subject, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  340 bits (872), Expect = 5e-98
 Identities = 180/382 (47%), Positives = 246/382 (64%), Gaps = 1/382 (0%)

Query: 1   MTFATLGLIEPLLRALETLGYQTPTPVQAQAIPAVLAGRDLMAAAQTGTGKTAGFAVPLL 60
           M+F+ LGL + L++ +  LGYQ PT +Q QAIP +L GRDL+AAAQTGTGKTA F +P+L
Sbjct: 1   MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60

Query: 61  QLLTMEGPKVAANSARALILCPTRELAEQVHASVAEYAQNLPLTTYAVYGGVSINPQMMK 120
           + L  +G        RALIL PTRELA QV   V +Y ++  L + AV+GGV    Q  +
Sbjct: 61  EKLR-QGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQR 119

Query: 121 LRKGVDILVATPGRLIDLFRQNALKLNQLQTLVLDEADRMLDLGFSEELANIYRMLPKKR 180
           L  GVD+LVATPGRL+DL+ Q A+   +++ +VLDEADRMLD+GF E +  I   LP + 
Sbjct: 120 LIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEV 179

Query: 181 QTLLFSATFSDDIRLLAGQMLNDPLSIEVSPRNVAANTVKQWVVPVDKKRKPELFVHLMR 240
           Q LLFSAT S  +R LA   + DP  I ++    + + + QW++ VDK  K  L  HL+ 
Sbjct: 180 QFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLIN 239

Query: 241 KGRWKQVLVFAKTRNGVDALVDKLQGLGINADGIHGDKPQATRQRALDRFKSSEVQILVA 300
           + +W Q L+F +T++G   LV +L+  GI+A+  H  + QA R + L+ FKS +++ LVA
Sbjct: 240 EQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVA 299

Query: 301 TDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGNTGEAISLVCADEVNMLSAIE 360
           T VAARG+DI+ L  VVN+DLP  A++Y+HRIGRTGRA   GEAIS V  D    L  IE
Sbjct: 300 TGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIE 359

Query: 361 MLTRQTLTRHMEQDFEPEHRVP 382
                 + R + + FEP+  VP
Sbjct: 360 SRLGHLIERRVVEGFEPKKPVP 381