Pairwise Alignments

Query, 444 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

Subject, 499 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  283 bits (723), Expect = 1e-80
 Identities = 169/424 (39%), Positives = 237/424 (55%), Gaps = 17/424 (4%)

Query: 3   FATLGLIEPLLRALETLGYQTPTPVQAQAIPAVLAGRDLMAAAQTGTGKTAGFAVPLLQL 62
           FA LGL + +L A+   GY  PTP+Q  AIP  L  RD++  AQTGTGKTA F +P+L L
Sbjct: 4   FADLGLSQKVLSAVTDAGYTIPTPIQVGAIPPALQRRDILGIAQTGTGKTASFVLPMLTL 63

Query: 63  LTMEGPKVAANSARALILCPTRELAEQVHASVAEYAQNLPLTTYAVYGGVSINPQMMKLR 122
           L  E  +  A   R LIL PTRELA QV  +  +Y +N  L    + GGVS + Q  KL 
Sbjct: 64  L--EKGRARARMPRTLILEPTRELAAQVAENFDKYGKNHKLNIALLIGGVSFDEQDRKLE 121

Query: 123 KGVDILVATPGRLIDLFRQNALKLNQLQTLVLDEADRMLDLGFSEELANIYRMLPKKRQT 182
           +G D+L+ TPGRL+D   +  L +  ++ LV+DEADRMLD+GF  ++  I +++P  RQT
Sbjct: 122 RGADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKLIPFTRQT 181

Query: 183 LLFSATFSDDIRLLAGQMLNDPLSIEVSPRNVAANTVKQWVVPV---DKKRKPELFVHLM 239
           L FSAT   +I+ LA + L +P  +EV+ R+  A TV Q  V     D +++  L   + 
Sbjct: 182 LFFSATMPPEIQKLADRFLQNPERLEVARRSSTAITVTQRFVAAHGKDYEKRAVLRELIR 241

Query: 240 RKGRWKQVLVFAKTRNGVDALVDKLQGLGINADGIHGDKPQATRQRALDRFKSSEVQILV 299
            +   K  ++F   +  V  L   L   G +   +HGD  Q +R   L  FK   +++LV
Sbjct: 242 SQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLLV 301

Query: 300 ATDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGNTGEAISLVCADEVNMLSAI 359
           A+DVAARGLDI D+  V NFD+PI AEDY+HRIGRTGRAG +G A ++V   E     AI
Sbjct: 302 ASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGAAFTIVTKRETKFSDAI 361

Query: 360 EMLTRQTL------TRHMEQDFEPEHRVPDTDASGQVVKKPKKP------KKPKSSGGGG 407
           E L  Q +         + +  E      D  + G+  +K ++P      +KP ++ G  
Sbjct: 362 EKLIGQKVEWFNGDLSELPEPMESHDSRRDRGSDGRKDRKRERPGKVHADRKPVTASGNN 421

Query: 408 KRNL 411
              L
Sbjct: 422 TEEL 425