Pairwise Alignments

Query, 444 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

Subject, 503 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  319 bits (817), Expect = 1e-91
 Identities = 181/410 (44%), Positives = 252/410 (61%), Gaps = 4/410 (0%)

Query: 2   TFATLGLIEPLLRALETLGYQTPTPVQAQAIPAVLAGRDLMAAAQTGTGKTAGFAVPLLQ 61
           TF  LGL E ++  L   G++ PTP+QAQAIP VL   DL+  AQTGTGKTA F +P+++
Sbjct: 3   TFKELGLSEHIVATLSANGFEKPTPIQAQAIPLVLKDHDLIGLAQTGTGKTAAFGLPMIE 62

Query: 62  LLTMEGPKVAANSARALILCPTRELAEQVHASVAEYAQNLPLTTYAVYGGVSINPQMMKL 121
            L  +G +    + RAL+L PTREL  Q+ A++  + +  PL    V GGVSIN Q  +L
Sbjct: 63  KLVADGRRPDPRNIRALVLAPTRELVNQIAANLKLFVKKSPLKIGLVVGGVSINKQTEQL 122

Query: 122 RKGVDILVATPGRLIDLFRQNALKLNQLQTLVLDEADRMLDLGFSEELANIYRMLPKKRQ 181
            +GVDILVATPGRL+DL  + A+ L Q + LVLDEAD+MLDLGF  +L  I +++PK RQ
Sbjct: 123 ARGVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLVPKNRQ 182

Query: 182 TLLFSATFSDDIRLLAGQMLNDPLSIEVSPRNVAANTVKQWV--VPVDKKRKPELFVHLM 239
           TLLFSAT    I  LAG+ L DP+ +EVSP   AA+ V+Q+V  VP  K  K  +    +
Sbjct: 183 TLLFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVP-GKDLKTTILKQTL 241

Query: 240 RKGRWKQVLVFAKTRNGVDALVDKLQGLGINADGIHGDKPQATRQRALDRFKSSEVQILV 299
                   L+F++T++G + L+  L  +G  A  IHG+K Q  R+RAL  F+  E+++LV
Sbjct: 242 TANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVLV 301

Query: 300 ATDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGNTGEAISLVCADEVNMLSAI 359
           ATDVAARG+DI  +  V N+DLP V + Y+HRIGRT R G  G AI+    DE+ +L  I
Sbjct: 302 ATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRIGRTARNGRDGIAIAFCAPDEIRLLRDI 361

Query: 360 EMLTRQTLTRHMEQDFEPEHRVPDTDASGQVVKKPKKPKKPKSSGGGGKR 409
           E L    +     +    + R P     G+   +P+   +P+ +G G ++
Sbjct: 362 EKLMGIQIAVASGEAPADQAR-PSKGRGGRGNGQPRGNGQPRGNGAGQRQ 410