Pairwise Alignments

Query, 444 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

Subject, 432 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  341 bits (874), Expect = 3e-98
 Identities = 182/369 (49%), Positives = 243/369 (65%)

Query: 1   MTFATLGLIEPLLRALETLGYQTPTPVQAQAIPAVLAGRDLMAAAQTGTGKTAGFAVPLL 60
           M F +      +L A+   GYQ  TP+Q +AIPA+  G+D++A+AQTGTGKTA FA+P+L
Sbjct: 1   MRFESFSFAPEILHAISECGYQKMTPIQKEAIPAIRRGQDVLASAQTGTGKTAAFALPIL 60

Query: 61  QLLTMEGPKVAANSARALILCPTRELAEQVHASVAEYAQNLPLTTYAVYGGVSINPQMMK 120
           Q +         ++ RALIL PTREL  QV  ++ +Y++ LP++   VYGGV ++ Q  K
Sbjct: 61  QKMFDSPSDTQRSNTRALILAPTRELVAQVADNIKQYSRYLPISVLTVYGGVKMDTQAAK 120

Query: 121 LRKGVDILVATPGRLIDLFRQNALKLNQLQTLVLDEADRMLDLGFSEELANIYRMLPKKR 180
           ++KG DI+VATPGRL++  +   L L+ +  LVLDEADRMLD+GF  ++  I + + + R
Sbjct: 121 VKKGADIIVATPGRLLEHLQACNLNLSNVDFLVLDEADRMLDMGFITDIQKILQQVNRDR 180

Query: 181 QTLLFSATFSDDIRLLAGQMLNDPLSIEVSPRNVAANTVKQWVVPVDKKRKPELFVHLMR 240
           Q LLFSATFS  ++ LA +ML  P  I V  +N  A TV Q V PV+++RK EL   L+ 
Sbjct: 181 QNLLFSATFSSAVKQLANEMLVKPKLIAVDKQNTTAVTVSQVVYPVEQRRKRELLSELIG 240

Query: 241 KGRWKQVLVFAKTRNGVDALVDKLQGLGINADGIHGDKPQATRQRALDRFKSSEVQILVA 300
           K  W+QVLVF  TR   D LV +L   GI +  +H +K Q  R+RAL  FK  +V+ LVA
Sbjct: 241 KKNWQQVLVFTATREAADVLVKELNLDGIPSAVVHSEKAQGNRRRALREFKEGKVRALVA 300

Query: 301 TDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGNTGEAISLVCADEVNMLSAIE 360
           T+VAARGLDI +L  VVNFDLP +AEDY+HRIGRTGRAG TG AISLV  +E   L+ IE
Sbjct: 301 TEVAARGLDIPELEYVVNFDLPFLAEDYVHRIGRTGRAGRTGVAISLVSREEERTLADIE 360

Query: 361 MLTRQTLTR 369
            L    + R
Sbjct: 361 KLIGNKIRR 369