Pairwise Alignments

Query, 444 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

Subject, 491 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  374 bits (960), Expect = e-108
 Identities = 202/442 (45%), Positives = 284/442 (64%), Gaps = 15/442 (3%)

Query: 1   MTFATLGLIEPLLRALETLGYQTPTPVQAQAIPAVLAGRDLMAAAQTGTGKTAGFAVPLL 60
           M F+ LGL   L++A+  LGY TPTP+Q +AIP++LAG++++AAAQTGTGKTA F +PLL
Sbjct: 1   MPFSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLL 60

Query: 61  QLLTMEGPKVAANSARALILCPTRELAEQVHASVAEYAQNLPLTTYAVYGGVSINPQMMK 120
                + PK+     RA+IL PTRELA QV  ++ +YA+ LPLT  A+YGGV   PQ  +
Sbjct: 61  HRFA-DAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKR 119

Query: 121 LRKGVDILVATPGRLIDLFRQNALKLNQLQTLVLDEADRMLDLGFSEELANIYRMLPKKR 180
           L +GVD+LVATPGRL+D++ Q A++ +++  LVLDEADRMLD+GF E++ +I   LP++R
Sbjct: 120 LIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQR 179

Query: 181 QTLLFSATFSDDIRLLAGQMLNDPLSIEVSPRNVAANTVKQWVVPVDKKRKPELFVHLMR 240
           Q LLFSAT S  ++ LA   + D + IE+S ++ A+  + QW+  VDK +K  L  HL++
Sbjct: 180 QNLLFSATLSKQVKALAKSAIPDAIEIEISRKSAASTHIDQWLTTVDKDKKSALLSHLIQ 239

Query: 241 KGRWKQVLVFAKTRNGVDALVDKLQGLGINADGIHGDKPQATRQRALDRFKSSEVQILVA 300
           +  W Q L+F +T++G   LV +L+  GI A+  H  + QA R++ L  FK+ +V  LVA
Sbjct: 240 EQNWSQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAVREQLLIDFKAGKVSFLVA 299

Query: 301 TDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGNTGEAISLVCADEVNMLSAIE 360
           T VA+RG+DI+ L  V+N+DLP  A+DYIHRIGRTGRAGN GEAIS V  D+   L AIE
Sbjct: 300 TGVASRGIDIDALARVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAIE 359

Query: 361 MLTRQTLTRHMEQDFEPEHRVPDT------DASGQVVKKPKKP------KKPKSSGGGG- 407
                 + R     FEP+  VP +       ++ +  +KP  P       +P SSG  G 
Sbjct: 360 RRLGHVIVRREIAGFEPKKVVPISILDFVPKSASKTERKPNSPAETNLQSRPYSSGKPGT 419

Query: 408 -KRNLGKWVDSGEVAPAEPSIK 428
            +    K   S + APA  + K
Sbjct: 420 FEATQAKKHRSAKAAPAPKAQK 441