Pairwise Alignments

Query, 339 a.a., flagellar motor protein MotB from Pseudomonas simiae WCS417

Subject, 394 a.a., flagellar motor protein MotB from Sinorhizobium meliloti 1021

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 35/57 (61%), Positives = 42/57 (73%)

Query: 4  NQPIIIKRVKRFAAGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYF 60
          N+ II++R      GHHGG WKIA+ADF TAMMAFFLV+WL++ A  E K AIA YF
Sbjct: 11 NEIIIVRRSADSHDGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEETKAAIAAYF 67



 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 19/177 (10%)

Query: 96  ESPQEKIPIERDTVEAMAEQVEQERLELLLQELQNKVEENPQLLKFKDQISFEITPDGLR 155
           ++P+ + P E    EA A + E E+            E      +  + ++      GL 
Sbjct: 229 DAPENQAPAENPQKEAEALKAEIEK------------ELGGGAGRLLEGLAVTPAEGGLL 276

Query: 156 IQITDAANRPMFDSGSARLKPYFEDILLAMADTIKAV---PNKISISGHTDAKPYAGQGD 212
           + I++  + PMF  GSA  +   ++++LAM    + +   P  +++ GHTD +P+   G 
Sbjct: 277 VTISEQTDAPMFAVGSAVPQ---KELVLAMEKIGRLLAERPGAVAVRGHTDGRPFK-DGT 332

Query: 213 FGNWELSANRANAARRALVAGSYPDPQVARVVGFASSQLFDAKDPFNPINRRIDIVV 269
           + NW LSA RA +A   LV G   + +V ++ GFA  +L    D + P NRRI+I++
Sbjct: 333 YDNWRLSAARAQSAYYMLVRGGLEEERVKQISGFADRRLQVPNDAYAPANRRIEILL 389