Pairwise Alignments

Query, 578 a.a., peptidase from Pseudomonas simiae WCS417

Subject, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (532), Expect = 3e-58
 Identities = 159/548 (29%), Positives = 271/548 (49%), Gaps = 18/548 (3%)

Query: 15  YKSGFFNIGLFSAVINLLMLAPALYMLQVYDRVLASGNQMTL--LMLTLMILGLFG--LM 70
           +K     I LFS V+ +L L   L+   V D+VL      TL  L+  L+I G+    L 
Sbjct: 157 HKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLR 216

Query: 71  GALEWVRSQVVIRLGTQMDMRLNQRVYDAAFEAQLKGGTQAAGQALHDLTTLRQFATGQA 130
           G  E+  +    R+  Q+ ++L Q ++             A    + +L T+R+F TG  
Sbjct: 217 GLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDTIREFLTGSM 276

Query: 131 LFAFFDAPWFPVYLLVIFLFHPWLGLLALVGAVLLIVLAWVNHHVSQAPMALASQLSINA 190
                +  +  V+L V+ L    L  L +      ++LAW      QA  A+  Q S  A
Sbjct: 277 FTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQA--AIEKQFSHAA 334

Query: 191 SQQA--TANLRNADTIEAMGMLATLRARWFGQHQAFLAQ----QNLASEKTATVTAWSKG 244
           +  +  T  +  ++T++++ +      RW  Q +  +      Q L +     V    K 
Sbjct: 335 ANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKI 394

Query: 245 VRLALQSLVLGLGALLAVQGDITPGMMIAGSILMGRVLSPIDQLIGVWKQWGSARLAFDR 304
             +A    +L LGA   +  ++T G +IA +++   +  P+ +++ +W Q+   R+A ++
Sbjct: 395 TSVA----ILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEK 450

Query: 305 LSQMLEANPARPERMTLPVPKGQLSVEQISACAPGSRRPALANLGFNLAAGEVLGVIGPS 364
           L  ML     +          G +S + I         P + +L  ++ AGE LGV+G S
Sbjct: 451 LGDMLNLPVEQHTGSDNVTISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTS 510

Query: 365 GCGKSTLARILVGAWGPLAGKVRLDGADLALWDKQQLGPHIGYLPQDIQLFAGSIAQNIA 424
           G GKSTLAR+L+  + P  G + +DG  L   + QQL   +G + Q+  LF  S+++NIA
Sbjct: 511 GSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIA 570

Query: 425 RFT-EVDADKVFAAAQLAGVHELILQLPQGYDTHLGEGGAGLSGGQKQRVALARALYGLP 483
           +   E   +++  AA+L+G H+ IL+LP GYDT L EGG  LSGGQ+QR+A+AR L   P
Sbjct: 571 QSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDP 630

Query: 484 ALIVLDEPNANLDEGGEHALLRAIAQLKQQRRTIILITHKPNVLSLTDQLLILKDGQMQS 543
            +++LDE  + LD+  + A+++A      + RT+I I H+ + +   D++++L  G +  
Sbjct: 631 KVLILDEATSALDDESQ-AVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVE 689

Query: 544 FGPTARVL 551
            G   ++L
Sbjct: 690 QGSHQQLL 697