Pairwise Alignments

Query, 578 a.a., peptidase from Pseudomonas simiae WCS417

Subject, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  211 bits (536), Expect = 1e-58
 Identities = 158/547 (28%), Positives = 269/547 (49%), Gaps = 16/547 (2%)

Query: 16  KSGFFNIGLFSAVINLLMLAPALYMLQVYDRVLASGNQMTLLMLTLMILGLFGLMGALEW 75
           KS   ++ L++  + +  L   +    V D+VL   +  +L +L L +L L     A  +
Sbjct: 164 KSQLRDVFLYAIALQIFALVSPMLFENVIDKVLVGRSLSSLHVLALAMLALAIAEPAYSY 223

Query: 76  VRSQVVIRLGTQMDMRLNQRVYDAAFEAQLKGGTQA-AGQAL---HDLTTLRQFATGQAL 131
           +R+ V   L +Q++  L+ R+Y       L    Q   GQ +    ++  +RQF TG  L
Sbjct: 224 LRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARVREMAQIRQFLTGSTL 283

Query: 132 FAFFDAPWFPVYLLVIFLFHPWLGLLALVGAVLLIVLAWVNHHVSQAPMALASQLSINAS 191
               D  +  V+L V+F +   L  L +   V+  VL  +   + +  +    +   NA+
Sbjct: 284 MLLLDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVLWLIAGPLIRKKVESEYESDANAT 343

Query: 192 QQATANLRNADTIEAMGMLATLRARWFGQHQAFLAQQ---NLASEKTATVTAWSKG-VRL 247
              T  +   +TI+          R+  Q Q  L+QQ   +  ++K+  +   +   V+ 
Sbjct: 344 TFLTEAVTGIETIKT----TATEHRFLEQWQRILSQQLNRSFDAQKSGLIAGQAIALVQK 399

Query: 248 ALQSLVLGLGALLAVQGDITPGMMIAGSILMGRVLSPIDQLIGVWKQWGSARLAFDRLSQ 307
              +L+L  G    ++G+ITPG ++A ++L G V  P+ +L  +W+ +    +A  R+  
Sbjct: 400 LTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVGD 459

Query: 308 MLEANPARPERMTLPVPK--GQLSVEQISACAPGSRRPALANLGFNLAAGEVLGVIGPSG 365
           +L+      ++    VP+  G +    I           LANL   +  G+ +GV GPSG
Sbjct: 460 ILDEPRENSKQGLASVPELDGGIEFSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPSG 519

Query: 366 CGKSTLARILVGAWGPLAGKVRLDGADLALWDKQQLGPHIGYLPQDIQLFAGSIAQNIAR 425
            GKSTL R+L   + P  G+V +DG DLA+ D   L  ++  + Q+  LF+GS+A NI  
Sbjct: 520 SGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRL 579

Query: 426 F-TEVDADKVFAAAQLAGVHELILQLPQGYDTHLGEGGAGLSGGQKQRVALARALYGLPA 484
              +   +++  AAQLAG    I  LP G++  +GE GA LSGGQ+QR+ALARAL   P 
Sbjct: 580 CKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQRQRIALARALLVNPR 639

Query: 485 LIVLDEPNANLDEGGEHALLRAIAQLKQQRRTIILITHKPNVLSLTDQLLILKDGQMQSF 544
           +++LDE  + LD   E +++  + ++  + RT+I I H+ N +   D + +L  GQ+   
Sbjct: 640 ILLLDEATSALDYNSEASIMSNMDEI-CRGRTVISIAHRLNTIRHADNIFVLDKGQVAES 698

Query: 545 GPTARVL 551
           G    +L
Sbjct: 699 GTHEELL 705