Pairwise Alignments

Query, 283 a.a., flagellar motor protein MotA from Pseudomonas simiae WCS417

Subject, 292 a.a., flagellar motor protein MotA from Sinorhizobium meliloti 1021

 Score =  200 bits (509), Expect = 3e-56
 Identities = 105/280 (37%), Positives = 164/280 (58%), Gaps = 10/280 (3%)

Query: 4   IIGIIVVFASVLGGYVLSHGKIAALIQPFEVMIIGGAALGAFLQANPGYMTMHVIKKSLG 63
           IIG++V F  +LGGY+   G +  L QPFE+MIIGGA +G F+ AN    +M V+K +  
Sbjct: 4   IIGLLVTFGCILGGYMAMGGHLEVLNQPFELMIIGGAGIGGFIMAN----SMKVVKDTGK 59

Query: 64  MFGSRFTHTF-----YLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPAVLKD 118
             G  F H       YL+ LG++Y ++   R +    IE+ I++   S IF   P VL++
Sbjct: 60  ALGEAFRHKVPKEREYLDTLGVLYSLMRDLRTKSRNEIESHIDNPEESSIFQSAPTVLQN 119

Query: 119 ERMTAYICDYLRIMSSGNMAPHELEGLFDMELFSLKEELEHPSHAVTGIADGMPGFGIVA 178
           + +TA+ICDY+R++  GN   HE+E L D E+ ++  +     HA+T + D +P  GIVA
Sbjct: 120 KELTAFICDYVRLIIIGNARSHEIEALMDEEIQTITHDKMKCYHAMTTMGDALPAIGIVA 179

Query: 179 AVLGIVVTMASLGEGDQAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEINLY 238
           AVLG++  M ++ E  +  +G  + AALVGT  G+  +Y   GPL  ++    +++  LY
Sbjct: 180 AVLGVIKAMGAISEAPE-VLGAKIAAALVGTLLGVFLSYSIVGPLVANIKSVREKQNRLY 238

Query: 239 ESIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQ 278
             +K +L+A  +G  P +A+E+GRK +    RPS   +EQ
Sbjct: 239 VIVKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQ 278