Pairwise Alignments

Query, 283 a.a., flagellar motor protein MotA from Pseudomonas simiae WCS417

Subject, 252 a.a., MotA/TolQ/ExbB proton channel (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 23/259 (8%)

Query: 1   MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVMIIGGAALGAFLQANPGYMTMHVIKK 60
           +A ++GI++ F  ++G  +   G     +    ++I+ G  LGA L   P  + + V+  
Sbjct: 3   LATVLGILISFG-LIGTALSMGGNPLFFVDSAALLIVLGGTLGAALVHYPLPVALRVLSI 61

Query: 61  SLGMFGSRFTHTFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPAVLKDER 120
           +   F +R  H   L V+    E  +++RREG++++E  + +          P + K  +
Sbjct: 62  TRKAFATRL-HRIDL-VIDQFMEFAHRARREGLLSLEPAVRNLDD-------PFLRKGLQ 112

Query: 121 MTAYICDYLRIMSSGNMAPHELEGLFDMELFSLKEELEHPSHAVTGIADGMPGFGIVAAV 180
           +T              + P  +  + + E+ +L+            +A   P  G+V  +
Sbjct: 113 LTI-----------DGLEPDAIREIMESEIAALETRHSMGVDIFNALASYAPALGLVGTL 161

Query: 181 LGIVVTMASLGEGDQAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEINLYES 240
           +G+V  + S+   D +AIG  +  AL+ TF+G++ A   F PLA  L H +KEE+ L E 
Sbjct: 162 IGLVQMLRSMN--DPSAIGPAMAVALITTFYGVVLANLVFLPLAGKLRHRSKEEVQLMEM 219

Query: 241 IKASLVASASGMPPSLAVE 259
               ++A A G  P + +E
Sbjct: 220 QLEGILAIARGENPRIILE 238