Pairwise Alignments

Query, 283 a.a., flagellar motor protein MotA from Pseudomonas simiae WCS417

Subject, 251 a.a., MotA/TolQ/ExbB proton channel (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 60.8 bits (146), Expect = 3e-14
 Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 33/274 (12%)

Query: 1   MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVMIIGGAALGAFLQANPGYMTMHVIKK 60
           +A   G++  F  V+   +L   +         VMI+ G    + L   P    M  ++ 
Sbjct: 3   IATFFGVLTGFGLVISA-ILMGPEPGKFFDIASVMIVFGGTAASILVTFPLEEVMQAVRG 61

Query: 61  SLGMFGSRFTHTFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPAVLKDER 120
               FGS+       +V+  +  I   SRREG++A+E                 V  +  
Sbjct: 62  GCKAFGSKRVQA--QDVVNTMVRIAEISRREGLIALEN----------------VQTENA 103

Query: 121 MTAYICDYLRIMSSGNMAPHELEGLFDMELFSLKEELEHPSHAVTGIADGMPGFGIVAAV 180
           +    C  +    + N  P  + G   +E+ S+K            +A   P +G++  +
Sbjct: 104 LIKKACQLI----ADNADPGLIRGTVAIEIASMKRRHNVSIGVFNRLAGYSPAYGMIGTL 159

Query: 181 LGIVVTMASLGEGDQAAIGMHVGAALVGTFFGILAAYGFFGPLATSL-AHDAKEEINL-- 237
           +G+V  +A+L   D ++IG  +  A++ TF+G L +   F P+A  L A   +EE++L  
Sbjct: 160 IGLVQMLATL--NDPSSIGPAMAVAIITTFYGALLSNLLFLPIAGKLKARSMQEELHLLV 217

Query: 238 -YESIKASLVASASGMPPSLAVEFGRKVLYPKHR 270
            +E  K  L        P L  E     L PK R
Sbjct: 218 IFEGAKCIL----KNNNPRLVYEKLSSFLPPKER 247