Pairwise Alignments

Query, 441 a.a., hemolysin D from Pseudomonas simiae WCS417

Subject, 492 a.a., Type I secretion membrane fusion protein, HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  301 bits (770), Expect = 4e-86
 Identities = 165/426 (38%), Positives = 253/426 (59%), Gaps = 4/426 (0%)

Query: 20  DDKQYSRLGWLLVLGGFAGFLGWAALAPLDKGVAVPGKVMVSGHRKTVQHPAGGIVERID 79
           D +Q  R GWL++L  F G   WAA APL   V  PG ++V  +RKTVQH  GGI++ I 
Sbjct: 67  DSRQTIRAGWLIILVAFGGLGLWAATAPLSSAVGAPGTIVVESNRKTVQHLEGGIIKEIL 126

Query: 80  VRDGDVVSAGQVLLRLKETPLRAQMQSLRSQYLASLASEARLSAESEGLSAIRFGPELLN 139
           V++GD V  G  L+RL+ T   A    + +Q+    A EARL AE +    I F P+L+ 
Sbjct: 127 VKEGDRVHQGDPLIRLETTQALASAAVVSNQFETYQALEARLVAERDEQKTITFPPDLIA 186

Query: 140 ----DPEAAGTLSLQRQLFNSRAQALATEQQGLRETIAGAEAQLRGTRDSQASKVHQRAA 195
                PE A  L  Q+Q F+ R +++  +   L++ IA +  ++ G +  + SK  Q   
Sbjct: 187 VAKLKPETAEILQAQQQQFDERHKSIEGQVAILQKRIAQSRQEIEGLKVQRQSKKRQLEI 246

Query: 196 LNEQLQGLRELAREGYIPRNRLLDSERLYSQIDGAIAEDYGRIGQLQRQVMELRLRIRQL 255
             +++ GLREL  +GY PR R+L  ER  ++++G +  D   + + ++ V E  L+I Q 
Sbjct: 247 FQDEIVGLRELLAKGYTPRTRILAMEREMTRLEGEVGTDTSSMARAEQAVGEAELQIIQT 306

Query: 256 GEDFQKDLRGQLAETRTRSDDLRNRLASAEFELANSLVRAPASGVVVGLDVYTEGGVIKP 315
            + F++D+ GQL E +T+  +LR R   A   L+ +++ A  +GV+  L V+T GG+IKP
Sbjct: 307 RQQFREDVVGQLREVQTKLSELRERGTVATDVLSRTVLLASQAGVIQNLAVHTLGGIIKP 366

Query: 316 GQALMDIVPQGEPLLVEARVPVQMVDKVHPGLPVELMFSAFNQSTTPRVAGEVTLVSADR 375
           G+ LM+IVP+ + L++EA++  + +D V PG+  E+ FSAFN  T P + G ++ VSADR
Sbjct: 367 GETLMEIVPEDDRLVIEAQISPRDIDNVVPGMDTEVRFSAFNSRTIPIIDGVLSQVSADR 426

Query: 376 QVDERTDEPYYTLRAQVSAAGMQQLDGVQIRPGMPVETFVKTGERSMLNYLFKPLMDRTH 435
            V+ER    YY  R +VS   + +L G+ +R GMPV+  +KTGER++L+Y  KPL D   
Sbjct: 427 FVNERDSSSYYKARIEVSDEELAKLGGLALRAGMPVDVMIKTGERTVLHYFLKPLEDALF 486

Query: 436 MALVEE 441
             L+EE
Sbjct: 487 HGLIEE 492