Pairwise Alignments

Query, 359 a.a., tRNA (uracil-5-)-methyltransferase from Pseudomonas simiae WCS417

Subject, 438 a.a., 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD from Pantoea sp. MT58

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 15/181 (8%)

Query: 181 FTQPNGTVNQKMLNWAYEALGDRPDD-LLELYCGNGNFTLPLATRVRKVLATEISKTSVN 239
           F Q N  VNQ+M+  A   L  +P+D +L+L+CG GNFTLP+   V+ V+  E     V 
Sbjct: 269 FIQVNDGVNQQMVAKAIAWLDLQPEDRVLDLFCGMGNFTLPVGIFVQNVVGVEGIAALVR 328

Query: 240 AALSNLDENAVDNVTLVRLSAEELTEALNEVRPFRRLHGIDLKSYEFGSVFVDPPRAGMD 299
            A  N D N + NV+  + + EE        +P+         +  F  V +DP RAG  
Sbjct: 329 QAAYNADLNNLKNVSFFQHNLEEEVSR----QPW--------ATQGFNKVLLDPARAGAA 376

Query: 300 PDTCELTRRF-DNILYISCNPETLAANIAQLHDT-HKITQCAMFDQFPWTHHMESGVLLT 357
                + +   + ++Y+SCNP TLA +   L    +++ + AM D FP T H+ES VL  
Sbjct: 377 GVMAHVVKLAPERVVYVSCNPTTLARDSQILLSAGYQLERVAMLDMFPHTRHLESMVLFR 436

Query: 358 R 358
           +
Sbjct: 437 K 437