Pairwise Alignments

Query, 479 a.a., cytochrome D ubiquinol oxidase subunit I from Pseudomonas simiae WCS417

Subject, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

 Score =  398 bits (1022), Expect = e-115
 Identities = 205/432 (47%), Positives = 279/432 (64%), Gaps = 4/432 (0%)

Query: 4   LEALDLARIQFAFTISFHILFPAITIGLASYLAVLEGLWLKTHNDTYRDLYHFWSKIFAV 63
           L+ L L+RIQFA  ISFHILFP ITI L   L   +  +L+T    + DLY+FW K+FA+
Sbjct: 2   LDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFAL 61

Query: 64  NFGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGWNKV 123
            F +GVVSG+ M++QFGTNW  F +  G V GPLL YEV+TAFF+EA FLGVMLFG  +V
Sbjct: 62  TFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRV 121

Query: 124 GRNLHFFSTVMVAVGTLISTFWILSSNSWMQTPQGFEIIDGRVIPTDWFAVVFNPSFPYR 183
              LH  STV+VAVGT +S FWIL  NSWM TP G+E+IDG V  T W  V+FNPS PYR
Sbjct: 122 PEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGVVHVTSWKEVIFNPSMPYR 181

Query: 184 LAHMATAAFVATAFFVGSSAAWHLLRGKDNPAIRKMLSMAMWMALIVAPIQAVIGDFHGL 243
           LAH   A+ +  +F +   +A+ +LR   + A +  L +A+ +A +  P+Q ++GD HGL
Sbjct: 182 LAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHGL 241

Query: 244 NTLKHQPAKIAAIEGHWENIGNEPTPLILFGWPDMKAEKTKYAVEIPYLGSLILTHSLDK 303
           NTL+HQPAKIAA+EG W+       PL+LF  P+ +     +A+ IP L SLILTH ++ 
Sbjct: 242 NTLEHQPAKIAAMEGVWQT--ERGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMNG 299

Query: 304 QVPALKEFPPEDRPNSTIVFWSFRVMVGLGFLMIFTGLFSLWLRRGDKMYTSKPFLYLAL 363
           ++  L  F P D P    +F+ FRVMVG+G LM+    F  W R        KP++Y  +
Sbjct: 300 EIVGLDAFAP-DHPPVAPLFFGFRVMVGVGVLMLLVSWFGAW-RVWRNKPLPKPYMYALI 357

Query: 364 WMGPSGLIAILAGWFTTEIGRQPWVVYGLMRTADASSGHSLAQMTITLVLFVVVYFALFG 423
            M  SG +A +AGW+ TEIGRQPW+V G++RTA+A +  + + + I+L L+++ Y  L  
Sbjct: 358 GMTFSGWVATIAGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLLV 417

Query: 424 AGLGYMMRLVRK 435
           A +  +  L RK
Sbjct: 418 AYVHTLFYLARK 429