Pairwise Alignments

Query, 374 a.a., 50S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 332 a.a., 16S RNA G1207 methylase RsmC from Pseudomonas stutzeri RCH2

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 76/275 (27%), Positives = 125/275 (45%), Gaps = 12/275 (4%)

Query: 105 PTGPFDCVLIRVPKTLALLEEQLIRLQGQLAPGAQVIAGAMIKHLPRAAGELLERYIGPM 164
           P G +D  ++ +PK+  L +  L  L  QLA     + G     + RAA +L    +G  
Sbjct: 64  PPGEYDAAVLFLPKSRELTDYVLQALAAQLAGRPLYLVGEKRAGVERAAKQLAN--LGRA 121

Query: 165 QASLAVKKARLLIATPEDRPA-----AVSPYPTRYTLDTPAIELLNHANVFCRESLDIGT 219
           +   + +  +L     E  PA     A++ + T    D P +++++   VF    LD+G+
Sbjct: 122 RKLDSARHCQLWQGEIEQAPAVPELDALAHHFTLELEDGP-LQVISLPGVFSHGRLDVGS 180

Query: 220 RAFLPHLPKNLGSACVADLGCGNGVLAIASALQNPEAHYTLVDESYMAVQSAAENWHAAL 279
              L HL  NL S  V D GCG G+L      + P++   L+D    AV+S+     A  
Sbjct: 181 ALLLEHLD-NLPSGRVLDFGCGAGILGATLKRRYPQSELVLLDVDAFAVESSRRTLAANG 239

Query: 280 GERDVVVRAADGLAGQEPQSLDVVLCNPPFHQQQVVGDFLAWRMFQQAREALVVGGALYI 339
            E +V+  A DG+    P+ L  ++ NPPFHQ        +  + ++A E L  GG L +
Sbjct: 240 LEAEVI--AGDGI-DTAPRQLAAIVSNPPFHQGVHTSYQASETLIERAAEHLSSGGELRL 296

Query: 340 VGNRHLGYHTKLARLFRGVEQVATTPKFVILKARK 374
           V N  L Y   + +     + +     F I +A++
Sbjct: 297 VANAFLRYPPLIEQHLGACQTIVERNGFRIYRAKR 331