Pairwise Alignments

Query, 374 a.a., 50S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 67/269 (24%), Positives = 109/269 (40%), Gaps = 10/269 (3%)

Query: 110 DCVLIRVPKTLALLEEQLIRLQGQLAPGAQVIAGAMIKHLPRAAGELLERYIGPMQASLA 169
           D +L+  PK     E  L  L  +L  G +++     +   ++  ++   Y GP+    +
Sbjct: 78  DLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAAY-GPIHKYDS 136

Query: 170 VKKARLLIATPEDRPAA--VSPYPTRYTLDTPAIELLNHA--NVFCRESLDIGTRAFLPH 225
            ++           PAA  +  +   Y +D    EL   +   VF     D+G+R  L  
Sbjct: 137 ARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLPGVFSHGEFDLGSRLLLDT 196

Query: 226 LPKNLGSACVADLGCGNGVLAIASALQNPEAHYTLVDESYMAVQSAAENWHAALGERDVV 285
           LP   G   V D+G G GVL    A  NP     + D S +A++S+ E   A      V 
Sbjct: 197 LPPLSGK--VIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGHVY 254

Query: 286 VRAADGLAGQEPQSLDVVLCNPPFHQQQVVGDFLAWRMFQQAREALVVGGALYIVGNRHL 345
                 +        + ++ NPPFH           R+  ++ + L  GG++++V N  L
Sbjct: 255 ---PSDMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHLASGGSIWVVANSFL 311

Query: 346 GYHTKLARLFRGVEQVATTPKFVILKARK 374
            Y   L + F   +  A T KF I  A+K
Sbjct: 312 KYPPILEQAFGHCDIAAKTNKFAIYHAKK 340