Pairwise Alignments

Query, 455 a.a., DNA repair protein RadA from Pseudomonas simiae WCS417

Subject, 460 a.a., DNA repair protein RadA from Caulobacter crescentus NA1000

 Score =  390 bits (1003), Expect = e-113
 Identities = 219/452 (48%), Positives = 286/452 (63%), Gaps = 6/452 (1%)

Query: 1   MAKAKRMYGCTECGATFPKWAGQCTECGAWNTLTETM-IESGGAAAPTGRAGWTGQQAQI 59
           MA+   +Y C  CGA   KW+GQC+ C +WNTL E +  +  GA + T      G Q   
Sbjct: 1   MARDGAVYACQSCGAVQTKWSGQCSACQSWNTLVEEVSAKPPGALSATKATRVRGLQF-- 58

Query: 60  KTLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCSIASR- 118
            T  E      PR  T   E DRV GGG+V GS +LIGGDPG+GKST+LLQ   S A+R 
Sbjct: 59  -TGLESETAPPPRILTGVDEFDRVCGGGVVPGSALLIGGDPGVGKSTLLLQVCASAAARG 117

Query: 119 MPALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIESIIATARIEKPKVMVIDSIQTI 178
           +   Y++GEE+ +Q+  RA R+GL +  + +  ET +  I+   + +   ++VIDSIQT+
Sbjct: 118 VSCAYISGEEAVEQIRGRADRMGLAKANVSLAAETALRDILDGLKRDNFDLVVIDSIQTM 177

Query: 179 FTEQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLY 238
           +++  ++ PG V+QVR  A  LVR AK+ G AI LVGHVTK+G +AGPRV+EH+VD VL 
Sbjct: 178 WSDAHEAGPGTVTQVRACATELVRLAKKKGVAILLVGHVTKDGQIAGPRVVEHLVDAVLS 237

Query: 239 FEGESDGRLRLLRAVKNRFGAVNELGVFAMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMA 298
           FEGE     R+LR  KNRFGA +E+GVF M D GL+EV NPSA+FL    E   G+ V A
Sbjct: 238 FEGERGYPFRILRGAKNRFGATDEIGVFEMGDVGLREVKNPSALFLNEGGERAAGAAVFA 297

Query: 299 TWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNV 358
             EG+RP+LVE QALV  S    PRR  +G D  RLAM+LAVL    G+   D+DV+LNV
Sbjct: 298 GIEGSRPVLVEFQALVAPSAYGTPRRAVVGWDSGRLAMVLAVLEARCGLGFGDKDVYLNV 357

Query: 359 VGGVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKH 418
            GG+++ E A+DLA  AA+ SS  +  LP D +VFGE+ LSGEVRPV   + RLKEAAK 
Sbjct: 358 AGGLRITEPAADLAAAAALASSALDVALPQDCVVFGELSLSGEVRPVSRMETRLKEAAKL 417

Query: 419 GFKRAIVPKGNAPKESPPGITIIGVTRLEQAL 450
           GF RA+ P    P E    + + GV RL  A+
Sbjct: 418 GFGRALGPLAGLP-EGGGALPVAGVARLTDAV 448