Pairwise Alignments

Query, 557 a.a., recombination and repair protein from Pseudomonas simiae WCS417

Subject, 559 a.a., DNA repair protein RecN from Rahnella sp. WP5

 Score =  464 bits (1195), Expect = e-135
 Identities = 248/557 (44%), Positives = 358/557 (64%), Gaps = 7/557 (1%)

Query: 1   MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGAD 60
           ML  L++ N+AIV  L+++   GM+ ITGETGAGKSI +DALGL LG+RAD  +VR GA 
Sbjct: 7   MLAQLTISNFAIVRELEIDFHAGMTAITGETGAGKSIAIDALGLCLGNRADGSMVRLGAS 66

Query: 61  KADILATFDLADIPEAEAWLSERDLNNEGPCILRRVITAEGRSRGYINGTPCPLGDLKAL 120
           +ADI A F LAD P A+ WL+E  L+    C+LRR I+ +GRSRG+INGTP PL  L+ L
Sbjct: 67  RADICARFTLADTPSAKHWLAENQLDEGLDCLLRRTISNDGRSRGFINGTPVPLSQLREL 126

Query: 121 GELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVQLAAQRWRQTRQELERLSNSG 180
           G+ LI IH QH HQ LLK +  + LLD Y+    L  +++ A Q W Q+ ++L +     
Sbjct: 127 GQHLIQIHGQHAHQLLLKPEHQKALLDAYSDQPLLLSEMRKAYQNWHQSCRQLAQYQQQM 186

Query: 181 DEQRARHQLLSYQLEELESLGLGETELEQLEQEHKNLTNAETLLGICRQVVEQCSESDSG 240
            E+ +R QLL YQL+EL        E EQ+++E+K L N+  LL + +  +   ++ +  
Sbjct: 187 SERESRRQLLQYQLKELNEFAPQAGEYEQIDEEYKRLANSGQLLSLSQNALYLLADGEEQ 246

Query: 241 NVLNALTASLNRLSSVNSGSGSLSEATTLLTSAQIQVEEAVGELNRFLDHFDADPARLQE 300
           N+++ L ++ N+L+ +      +++   +L  A IQV EA  EL  + +  D DP RL E
Sbjct: 247 NIVSLLYSARNQLTELAELDSKMNDLIVMLDDASIQVSEASDELRHYSERLDMDPNRLFE 306

Query: 301 IEERLDTIYTLARKHRIQPTEVATMQQKLLDEIETLNANDESIERLSGELASFARHYQEK 360
           +E+RL     LARKH +   ++  + ++LL+E + L+  + +   LS    +  RHYQ+ 
Sbjct: 307 LEQRLSRQMNLARKHHVSAEDLPELHRQLLEEQQELDDQETNQAELS---EAVQRHYQQA 363

Query: 361 ---ARELSDLRQQAATGLASAVELEIQRLGMPGGRFTIELRTSASNELQPHGLEQVELLV 417
              A +L + RQ  A  L   +   +Q L MP G+F I+++    + L   G +++E  V
Sbjct: 364 VAVAEQLHEKRQYFADELTHLITQSMQALSMPHGKFKIQVQFEPEH-LNMEGADRLEFQV 422

Query: 418 SANPGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQL 477
           + NPGQPL+ALAKVASGGELSRI+LAIQVITAQ    P L+FDEVDVGI GPTA IVG+L
Sbjct: 423 TTNPGQPLQALAKVASGGELSRIALAIQVITAQKMETPALIFDEVDVGISGPTAAIVGRL 482

Query: 478 LRRLGDRGQVLTVTHLPQVAAQGHQHLFVHKVRGSDATHTAVSKLNKSERVEEVARMLGG 537
           LR+LG+  QV+ VTHLPQVA  GHQH FV K    + T T +++L+K  R++E+AR+LGG
Sbjct: 483 LRQLGESTQVMCVTHLPQVAGCGHQHYFVSKETDGEVTETQMNRLDKKARLQELARLLGG 542

Query: 538 IDLTKESLAHAKKMVVA 554
            ++T+ +LA+AK+++ A
Sbjct: 543 SEVTRNTLANAKELLAA 559