Pairwise Alignments

Query, 557 a.a., recombination and repair protein from Pseudomonas simiae WCS417

Subject, 550 a.a., DNA repair protein RecN from Pedobacter sp. GW460-11-11-14-LB5

 Score =  325 bits (832), Expect = 4e-93
 Identities = 196/553 (35%), Positives = 315/553 (56%), Gaps = 5/553 (0%)

Query: 1   MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGAD 60
           ML  LS+ NYA+++ LD+E D+G+++ITGETGAGKSI+L AL L LG RA+S        
Sbjct: 1   MLQKLSIRNYALIDSLDIEFDKGLNIITGETGAGKSIILGALSLILGQRAESKYFFNQDK 60

Query: 61  KADILATFDLADIPEAEAWLSERDLNNEGPCILRRVITAEGRSRGYINGTPCPLGDLKAL 120
           K  I  +F LAD    E +  E DL+     ILRR I+ +G++R +IN TP  L  LK +
Sbjct: 61  KCVIEGSFALADENLKELF-EENDLDFSNESILRREISIDGKTRSFINDTPVNLSVLKQI 119

Query: 121 GELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVQLAAQRWRQTRQELERLSNSG 180
           GE LIDIHSQH  Q +   D    ++D  A    L    +   ++ RQ    L++L +  
Sbjct: 120 GEKLIDIHSQHATQEINDADFQLLIVDSLANHQSLLFNYRSGFKKLRQDTNLLKKLVSEA 179

Query: 181 DEQRARHQLLSYQLEELESLGLGETELEQLEQEHKNLTNAETLLGICRQVVEQCSESDSG 240
           DE R +     +   ELE   L E E ++LEQE + LT+AET+           +ES+  
Sbjct: 180 DEARNKQDYEQFLFNELEQAKLQEGEQQELEQELERLTHAETIKRALLTASGLINESEPS 239

Query: 241 NVLNALTASLNRLSSVNSGSGSLSEATTLLTSAQIQVEEAVGELNRFLDHFDADPARLQE 300
            +     ASL +L S+     +++     L S+ I++++   E++   ++      RL+ 
Sbjct: 240 ALQILKEASL-QLQSIEKFDPAINVLYERLRSSIIEIKDITDEVSGIEENTLHSADRLEL 298

Query: 301 IEERLDTIYTLARKHRIQP-TEVATMQQKLLDEIETLNANDESIERLSGELASFARHYQE 359
           + +RLD  Y+L +KHR+   TE+  +Q++L + +  L ++DE I +L  E+    +   +
Sbjct: 299 VNQRLDLFYSLQQKHRVADNTELLAVQKQLEENLNKLLSSDEHIGKLQQEIEQLKKELHK 358

Query: 360 KARELSDLRQQAATGLASAVELEIQRLGMPGGRFTIELRTSASNELQPHGLEQVELLVSA 419
           +A +LS  R++A   +     + ++++GM   +  ++ +     EL   GL+++ LL +A
Sbjct: 359 QADQLSANRKKAIKVVEEQTSITLKKVGMLNAKLVLDQKVLG--ELNKDGLDEINLLFTA 416

Query: 420 NPGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLR 479
           N GQ    + KVASGGELSR+ LAI+ + A+ + +PT++FDE+D GI G TA  VG+++ 
Sbjct: 417 NAGQAPAPVNKVASGGELSRLMLAIKALLAKHTSLPTIIFDEIDTGISGETALKVGEVIA 476

Query: 480 RLGDRGQVLTVTHLPQVAAQGHQHLFVHKVRGSDATHTAVSKLNKSERVEEVARMLGGID 539
            LG   QV+++THLPQ+AA+G  H FVHK      T T + KL + ER+  +A ML G +
Sbjct: 477 DLGQNMQVISITHLPQIAAKGISHYFVHKNEDRGKTTTGIRKLKQEERIGVIAEMLSGKN 536

Query: 540 LTKESLAHAKKMV 552
               ++ +A++++
Sbjct: 537 PGASAMENARELL 549