Pairwise Alignments

Query, 557 a.a., recombination and repair protein from Pseudomonas simiae WCS417

Subject, 553 a.a., DNA repair protein RecN from Escherichia coli Nissle 1917

 Score =  449 bits (1155), Expect = e-130
 Identities = 243/554 (43%), Positives = 342/554 (61%), Gaps = 1/554 (0%)

Query: 1   MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGAD 60
           ML  L++ N+AIV  L+++   GM+VITGETGAGKSI +DALGL LG RA++ +VR GA 
Sbjct: 1   MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAA 60

Query: 61  KADILATFDLADIPEAEAWLSERDLNNEGPCILRRVITAEGRSRGYINGTPCPLGDLKAL 120
           +AD+ A F L D P A  WL E  L +   C+LRRVI+++GRSRG+INGT  PL  L+ L
Sbjct: 61  RADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLREL 120

Query: 121 GELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVQLAAQRWRQTRQELERLSNSG 180
           G+LLI IH QH HQ L K +  + LLD YA  T   +++    Q W Q+ ++L       
Sbjct: 121 GQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSQLQEMTARYQLWHQSCRDLAHHQQLS 180

Query: 181 DEQRARHQLLSYQLEELESLGLGETELEQLEQEHKNLTNAETLLGICRQVVEQCSESDSG 240
            E+ AR +LL YQL+EL        E EQ+++E+K L N+  LL   +  +   ++ +  
Sbjct: 181 QERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDA 240

Query: 241 NVLNALTASLNRLSSVNSGSGSLSEATTLLTSAQIQVEEAVGELNRFLDHFDADPARLQE 300
           N+ + L  +   +S +      LS    +L  A IQ+ EA  EL  + D  D DP RL E
Sbjct: 241 NLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFE 300

Query: 301 IEERLDTIYTLARKHRIQPTEVATMQQKLLDEIETLNANDESIERLSGELASFARHYQEK 360
           +E+R+    +LARKH + P  +    Q LL+E + L+   +S E L+  +    +   E 
Sbjct: 301 LEQRISKQISLARKHHVSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALET 360

Query: 361 ARELSDLRQQAATGLASAVELEIQRLGMPGGRFTIELRTSASNELQPHGLEQVELLVSAN 420
           AR L   RQ  A  LA  +   +  L MP G+FTI+++    + L   G +++E  V+ N
Sbjct: 361 ARALHQQRQHYANELAQLITDSMHALSMPHGQFTIDVKFD-EHHLGADGADRIEFRVTTN 419

Query: 421 PGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR 480
           PGQP++ +AKVASGGELSRI+LAIQVITA+    P L+FDEVDVGI GPTA +VG+LLR+
Sbjct: 420 PGQPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQ 479

Query: 481 LGDRGQVLTVTHLPQVAAQGHQHLFVHKVRGSDATHTAVSKLNKSERVEEVARMLGGIDL 540
           LG+  QV+ VTHLPQVA  GHQH FV K      T T +  L+K  R++E+AR+LGG ++
Sbjct: 480 LGESTQVMCVTHLPQVAGCGHQHYFVSKETDGAMTETHMQSLDKKARLQELARLLGGSEV 539

Query: 541 TKESLAHAKKMVVA 554
           T+ +LA+AK+++ A
Sbjct: 540 TRNTLANAKELLAA 553