Pairwise Alignments

Query, 754 a.a., DNA topoisomerase IV subunit A from Pseudomonas simiae WCS417

Subject, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

 Score = 1013 bits (2618), Expect = 0.0
 Identities = 493/745 (66%), Positives = 616/745 (82%), Gaps = 2/745 (0%)

Query: 8   SLDGVERRSLADFTENAYLNYSMYVIMDRALPHIGDGLKPVQRRIIYAMSELGLDADSKH 67
           S DGVE+  L  FTE+AYLNYSMYVIMDRALP+IGDGLKPVQRRIIYAMSELGL A +K+
Sbjct: 6   SFDGVEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKY 65

Query: 68  KKSARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRY 127
           KKSARTVGDVLGK+HPHGDSACYEAMVLMAQPFSYRY LVDGQGNWGAPDDPKSFAAMRY
Sbjct: 66  KKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRY 125

Query: 128 TEARLSRYSEVLLSELGQGTADWGPNFDGTLDEPLVLPARLPNILLNGTTGIAVGMATDV 187
           TEA+LS+++E+LLSELGQGT DW PNFDGT+ EP +LPARLP+ILLNG TGIAVGMATD+
Sbjct: 126 TEAKLSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDI 185

Query: 188 PPHNLREVATACVRLLDEPKATVEQLCEHIQGPDYPTEAEIITPRADLLKMYETGKGSVR 247
           PPHN+REVA A + L+D P A +  L ++++GPD+PTEAEIITP  +L K+Y +G+GS++
Sbjct: 186 PPHNVREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIK 245

Query: 248 MRAVYHIEDGDIIVTALPHQVSGAKVLEQIAALMQAKPSKLPQVADLRDESDHENPCRIV 307
           MRAV+  E  DI++TALPHQVSGAK+LEQIAA M+AK  KLP V DLRDESDHENP RIV
Sbjct: 246 MRAVWCKEGSDIVITALPHQVSGAKLLEQIAAQMRAK--KLPMVEDLRDESDHENPTRIV 303

Query: 308 IIPTNSRVDHEVLMQHLFASTDLESSYRVNVNIIGLDGKPQLKNLRNLLVEWLEFRVQTV 367
           I+P ++RVD ++LM HLFASTDLE S+RVN+N+IGLD +PQ+K L  +L EW+ FR +TV
Sbjct: 304 IVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRETV 363

Query: 368 RRRLQFRLDKVERRLHLLDGLLIAYLNLDEVIHIIRTAEHPKAELIARFELSEIQADYIL 427
           R RLQ+RLDKV  RLH+L GLLIAYLNLDEVI IIR  + PKA L+ARF+L++IQAD IL
Sbjct: 364 RSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLMARFDLTDIQADAIL 423

Query: 428 DTRLRQLARLEEMKLRDEQDALLKEQAKLQALLGSEAKLKKLVRSELIKDAETYGDDRRS 487
           DT+LR LA+LEEMK+R EQD L KE+ KL+ LLGSE +L  L++ E+  DA+ +GDDRRS
Sbjct: 424 DTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKFGDDRRS 483

Query: 488 PIVQRAEAKALTETELLPNEKITVVLSEKGWVRSAKGHDIDATGLSYKAGDGFKTAAAGR 547
           P+V+R EAKALTE +L+P+E ITVVLSEKGW+R AKGHD+D   L+YKAGD + T A G+
Sbjct: 484 PLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQSLNYKAGDNYLTHACGK 543

Query: 548 SNQFAVFIDSTGRSYSVPAHTLPSARGQGEPLTGRLTPPPGANFECVLLPDDDALYVIAS 607
           SNQ AVF+ S GRSYS+ +HTLPSARGQGEP+TGRL    G     V++ ++D L+++ S
Sbjct: 544 SNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIRQVVMGEEDQLWLVGS 603

Query: 608 DAGYGFVVKGEDLQAKNKAGKALLSLPNNAKVILPRPVDDREGNWLASVTTEGRLLVFKI 667
           DAGYGFV KG+DL +KN++GKAL++LP N++V+ P+ + D + + + ++T +GR+L+F I
Sbjct: 604 DAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQVIADLDNDEILAITNQGRMLLFPI 663

Query: 668 SDLPQLGKGKGNKIIGIPGERVASREEYVTDIAVIPEGATLVLQAGKRTLSLRPDDLEHY 727
            DLPQL KGKGNKII IP  +  +REE ++++ V+P+GA++ L AGKR L L+  DL+++
Sbjct: 664 KDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQGASITLYAGKRKLGLKVSDLDNF 723

Query: 728 KGERGRRGNKLPRGFQRVDALLVET 752
           +GERGRRG  LPRG QRV A+ +ET
Sbjct: 724 RGERGRRGALLPRGLQRVTAIEIET 748