Pairwise Alignments

Query, 1073 a.a., carbamoyl phosphate synthase large subunit from Pseudomonas simiae WCS417

Subject, 1119 a.a., carbamoyl-phosphate synthase large chain from Phaeobacter inhibens DSM 17395

 Score = 1254 bits (3246), Expect = 0.0
 Identities = 667/1114 (59%), Positives = 807/1114 (72%), Gaps = 55/1114 (4%)

Query: 1    MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM 60
            MPKRTDI+SI+I+GAGPI+IGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDP +
Sbjct: 1    MPKRTDIQSIMIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPGL 60

Query: 61   ADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANA 120
            ADATYIEPI  + VAKIIEKERPDALLPTMGGQT LN AL LE  GVL KF VEMIGA  
Sbjct: 61   ADATYIEPITPEVVAKIIEKERPDALLPTMGGQTGLNTALALEEMGVLAKFDVEMIGAKR 120

Query: 121  DTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANA-------------VLETLGFPCI 167
            + I+ AEDR  F +AM  +GL  PR+ I  + ++ N               LE +G P I
Sbjct: 121  EAIEMAEDRKLFREAMDRLGLENPRATIITAPKKDNGNADLDAGVQMALDELEDIGLPAI 180

Query: 168  IRPSFTMGGTGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDN 227
            IRP+FT+GGTGGG+AYNRE++   C  G+D SP  ++L+DESL+GWKEYEMEVVRD  DN
Sbjct: 181  IRPAFTLGGTGGGVAYNREDYIHFCRSGMDASPVNQILVDESLLGWKEYEMEVVRDTADN 240

Query: 228  CIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFG 287
             IIVCSIEN DPMGVHTGDSITVAPA TLTDKEYQ++R+AS+AVLREIGVETGGSNVQ+ 
Sbjct: 241  AIIVCSIENIDPMGVHTGDSITVAPALTLTDKEYQMMRSASIAVLREIGVETGGSNVQWA 300

Query: 288  ICPNTGRMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPAS 347
            + P  GRMVVIEMNPRVSRSSALASKATGFPIAK+AAKLAVG+TLDEL NDIT G TPAS
Sbjct: 301  VNPADGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELDNDIT-GVTPAS 359

Query: 348  FEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVC 407
            FEP+IDYVVTK+PRFAFEKFA ++  LTT MKSVGE MAIGRT  ESLQKAL  +E G+ 
Sbjct: 360  FEPTIDYVVTKIPRFAFEKFAGSEPYLTTAMKSVGETMAIGRTIHESLQKALASMETGLT 419

Query: 408  GLDEKL---DLSNPESMSVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLV 464
            G DE          +  + + + ++    +R+  +A A R G++ +DI  +   DPWFL 
Sbjct: 420  GFDEVAIPGAEDETDGKAAVIKAISQQTPDRMRTIAQAMRHGLSDDDIHAVTKFDPWFLA 479

Query: 465  QIEDLIKEEEKVKTLGLASIDRDMMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLEIFP 524
            +I ++++ E K++  GL   D   +  +K  GF+D RLA L    E ++R  R  L +  
Sbjct: 480  RIREIVEAEAKIRAEGLPQ-DEHGLRAIKMLGFTDARLAMLTDQREGDIRAARRALGVNA 538

Query: 525  VYKRVDTCAAEFSTDTAYLYSTYEE------ECEAAPSGRDKIMILGGGPNRIGQGIEFD 578
            V+KR+DTCAAEF   T Y+YSTYE       ECEA PS + K++ILGGGPNRIGQGIEFD
Sbjct: 539  VFKRIDTCAAEFEAQTPYMYSTYEAPAFGDVECEARPSDKKKVVILGGGPNRIGQGIEFD 598

Query: 579  YCCVHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPK--- 635
            YCC HA  AL + GYETIM+NCNPETVSTDYDTSDRLYFEP+T E V+EI+  E      
Sbjct: 599  YCCCHACFALTDAGYETIMINCNPETVSTDYDTSDRLYFEPLTFEHVMEILTKELENGTL 658

Query: 636  -GVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATV 694
             GVIVQ+GGQTPLKLA ALE  G+PI+GTSPDAID AEDRERFQ +V +L L+QP N   
Sbjct: 659  HGVIVQFGGQTPLKLANALEEEGIPILGTSPDAIDLAEDRERFQALVNQLGLKQPHNGIA 718

Query: 695  RSEDEAIRAASKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHF 754
             ++ +A+  A +IG+PLV+RPSYVLGGRAMEIV + ++LKRY+ +AV VS DSPVLLD +
Sbjct: 719  STDAQALEIAEEIGFPLVIRPSYVLGGRAMEIVRDMDQLKRYIAEAVVVSGDSPVLLDSY 778

Query: 755  LNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKK 814
            L+ A+E+DVDA+CDGT+V +  IMQHIE+AGVHSGDSACSLPPYSL   +  E++ Q   
Sbjct: 779  LSGAVELDVDAICDGTEVHVAGIMQHIEEAGVHSGDSACSLPPYSLSKEVIAEVKTQTNA 838

Query: 815  MALELGVVGLMNVQLALQ----GED-IYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMA 869
            +A  L VVGLMN+Q A++    G+D IY+IEVNPRASRTVPFV+K    ++A IAARVMA
Sbjct: 839  LAKALNVVGLMNIQFAVKPDADGKDVIYLIEVNPRASRTVPFVAKSTDSAIASIAARVMA 898

Query: 870  GKTLKEIGFTKEIIPN---------------------FYSVKEAVFPFAKFPGVDPILGP 908
            G+ L          P+                     ++SVKEAV PFA+FPGVD +LGP
Sbjct: 899  GEPLSNFPKRAPYEPDAGYDVNVPMADPMTLADPDMPWFSVKEAVLPFARFPGVDTLLGP 958

Query: 909  EMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDK-PLVAGVARDLINLG 967
            EM+STGEVMG   +F  AF KAQMGA  VLP+ G AFIS++D DK  L+   A+ L+  G
Sbjct: 959  EMRSTGEVMGWDRSFARAFLKAQMGAGMVLPSEGRAFISIKDADKGTLMLDAAKILVEQG 1018

Query: 968  FEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVDMIKNDEVTLIINTTEGRQSIADSYS 1027
            F +VAT GT   ++  G+    VNKV EGRPHVVDM+K+  V L++NTTEG Q++ DS  
Sbjct: 1019 FTLVATRGTQSWLDGHGVPCELVNKVYEGRPHVVDMLKDGNVQLLMNTTEGAQAVQDSKD 1078

Query: 1028 IRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061
            +R  AL  KI   TT A   A   A+K   E  V
Sbjct: 1079 MRSVALYDKIPYFTTAAGANAAARAIKAQAEGDV 1112