Pairwise Alignments

Query, 158 a.a., transcription elongation factor GreA from Pseudomonas simiae WCS417

Subject, 167 a.a., transcription elongation factor GreB (RefSeq) from Shewanella sp. ANA-3

 Score =  102 bits (255), Expect = 2e-27
 Identities = 59/157 (37%), Positives = 93/157 (59%), Gaps = 2/157 (1%)

Query: 1   MTKYPMTVQGFKALEEEHAHLTKVVRPKLSQDIGTARELGDLKENAEYHAAREQQGMVEA 60
           M  + +T QG+  L++E  +L K  RP+++  +  A   GD  ENA+Y   +     +++
Sbjct: 1   MKAHLITRQGWMTLDKELKYLWKEYRPQITLKVQEAAAQGDRSENADYTYNKRLLRQIDS 60

Query: 61  RIRDIEGRLQNSVVIDVTTIPKTGKVIFGTTVEIANVETDESVVYHIVGEDEADFKLGKI 120
           R+R +  RL+   ++D +   + GK+ FG   E+ N E  E V Y IVG+DE D KLG I
Sbjct: 61  RVRYLVKRLEELKIVDYSP-QQEGKIYFGAWFELEN-EAGECVRYRIVGKDELDTKLGYI 118

Query: 121 SVGSPLARALIAKEEGDVVSVKTPGGVTEYEIVEVRH 157
           ++ SP+ARALI K+  D V V+TP G  E+ I ++R+
Sbjct: 119 TIDSPMARALIGKQVDDEVVVQTPSGPKEWYINDIRY 155