Pairwise Alignments

Query, 334 a.a., DNA topoisomerase IV subunit B from Pseudomonas simiae WCS417

Subject, 327 a.a., hypothetical protein from Pseudomonas stutzeri RCH2

 Score =  386 bits (992), Expect = e-112
 Identities = 187/326 (57%), Positives = 232/326 (71%), Gaps = 4/326 (1%)

Query: 9   ILMLSGLAATQVAAAPVAELKLVSEHPVDGMRGGNLSGLALCGKELWTVSDRDDDQIYRL 68
           + +LS ++A   A  P AELKL+SEHPV+GM GGNLSG+A CG  LW VSDR DD ++RL
Sbjct: 6   LTLLSLVSAPLWANEPAAELKLLSEHPVEGMAGGNLSGMAWCGDALWAVSDRVDDALFRL 65

Query: 69  DTRAAVWKAEKYGIVVPPVPESGLPWGLRSRTKAASFIRGGDLDFEGISCDAEGNRYIVS 128
           DT  + W+AE     V P P+SGLPWG+R R   +  +RGG LDFEG+SCD+ GNRY+VS
Sbjct: 66  DTSVSPWQAEPERFEVGPPPDSGLPWGMRMRAWVSGHVRGGHLDFEGLSCDSAGNRYVVS 125

Query: 129 EAHAAVLRVPFSGEQGDTEWLKIAPGMVREARASGMLLHFNALFEGLAISPDGNQIWLAA 188
           EA AAVLRV      G  EWL++   +VR+ARASGML HFNALFEG+A+ P   ++WLAA
Sbjct: 126 EADAAVLRV---SPAGTAEWLRLPDSLVRQARASGMLWHFNALFEGIAVDPKAERMWLAA 182

Query: 189 ERERRGLISIKRGQSVWDCEGACVLLSEAGKDVQPAKFTNAKAVSKDFADLALFNGKLFT 248
           ERERRGL+ + R QS W C G CVL+++ G    PA   +   + + F+ LA F  KLF 
Sbjct: 183 ERERRGLLVLHRKQSSWQCTGGCVLMAQGGNQQPPAALGDT-PLPRSFSALAFFGDKLFV 241

Query: 249 LERNAFQICRRDPATAKVELCWSFADETLAPERRYAQPYGLAEALLIDAEGAWLGIDNNF 308
           LE +A+++CRR PA   VE CWSFA E L  ERRY +PYG AEAL +DAEGAW+G+DNN 
Sbjct: 242 LEPSAYRVCRRSPANGAVERCWSFAGEALTDERRYGEPYGNAEALWVDAEGAWIGVDNNG 301

Query: 309 GPRADGEKRPMVYRFAAPAGGWSARP 334
             R DGEKRP+V+RFAAP GGW ARP
Sbjct: 302 KARGDGEKRPIVWRFAAPEGGWMARP 327