Pairwise Alignments

Query, 493 a.a., transcription elongation factor NusA from Pseudomonas simiae WCS417

Subject, 542 a.a., transcription elongation factor NusA from Sinorhizobium meliloti 1021

 Score =  415 bits (1067), Expect = e-120
 Identities = 213/468 (45%), Positives = 322/468 (68%), Gaps = 5/468 (1%)

Query: 4   EVLLVVESVSNEKGVPANVIFEALELALATATKKRFEDEVDLRVEINRHTGAYETFRRWT 63
           E+L + ++V+ EK +   ++  A+  A+  A + R+  E ++R +IN  TG     R   
Sbjct: 9   ELLQIADAVAREKVIDREIVLAAMADAIQKAARSRYGSESNIRADINPKTGEIRLQRLLE 68

Query: 64  VVEEADLDDPAIETWPSKVAQT-HPGAKVGDVVEEKIESIEFGRIAAQTAKQVIVQKVRE 122
           VVE+A+     I   P ++A+  +P AK+GD + + +  ++FGRIAAQ+AKQVIVQKVRE
Sbjct: 69  VVEKAEDYSTQI---PIELARDRNPDAKLGDFIADPLPPMDFGRIAAQSAKQVIVQKVRE 125

Query: 123 AERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVRLR 182
           AER +  D +++R+GEI++GTVK+V   NVIVDLG   E ++ R+++I RE  R G R+R
Sbjct: 126 AERDRQYDEFKDRVGEIVNGTVKRVEYGNVIVDLGRG-EGIIRRDEMIPRENMRYGDRVR 184

Query: 183 ALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAVRS 242
           A + ++R E RGPQ+ LSRT P+ +++LF +EVPEI +G+I++ + +RDPGSRAKIAV S
Sbjct: 185 AFVYDVRREQRGPQIFLSRTHPQFMVKLFTMEVPEIYDGIIQIKSVARDPGSRAKIAVVS 244

Query: 243 KDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIVDE 302
            D  IDP GAC+GMRGSRVQAV GEL GE++DI+ W  +PA F++NA+ PAEVA +++DE
Sbjct: 245 NDSSIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWSPDPASFIVNALQPAEVAKVVLDE 304

Query: 303 DAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRNFI 362
           DA  +++ V  + L+ AIGR GQNVRLASQLTGW ++++TE +   ++Q E  +  + F+
Sbjct: 305 DAERIEVVVPDEQLSLAIGRRGQNVRLASQLTGWDIDILTEQEESERRQKEFNERTQLFM 364

Query: 363 EELEVDEDLAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDTVNELRARAKDRLLTKAIA 422
           + L+VDE + QVL  EGF  +EE+AYV L+E+ +I+GFDEDT NEL+ RA++ L      
Sbjct: 365 DALDVDEMVGQVLASEGFAQVEELAYVELDEISSIEGFDEDTANELQTRAREYLEKIEAE 424

Query: 423 TEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLL 470
            + K  +   +++L +++G+   + + L   G+ T ED A  + DDL+
Sbjct: 425 MDAKRKELGVSDELRTIDGLTSQMLVALGEEGIKTIEDFAGCAADDLV 472