Pairwise Alignments

Query, 841 a.a., translation initiation factor IF-2 from Pseudomonas simiae WCS417

Subject, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

 Score =  917 bits (2369), Expect = 0.0
 Identities = 507/903 (56%), Positives = 636/903 (70%), Gaps = 68/903 (7%)

Query: 1   MTQVTVKQLADEVKTPVERLLQQMREAGLPHTAADEGVSDSEKQSLLTHLKSSH-KAKVE 59
           MTQ+TVK L++E+ TPV+RLL+Q+ +AG+    AD  VS+ EKQ LL HL+  H  A   
Sbjct: 1   MTQITVKALSEEIGTPVDRLLEQLADAGMNKAVADH-VSEDEKQKLLAHLRKEHGDATGS 59

Query: 60  EPRKITLQRKTTSTLRV-AG---SKSISVEVRKKKVFVQRSPEEIEAERKRELEERRAVE 115
           EP ++TLQRKT STL V AG   SK++ VEVRKK+ +V+RS  E EA R+ E    RA E
Sbjct: 60  EPTRLTLQRKTRSTLSVNAGGGKSKNVQVEVRKKRTYVKRSSVEDEATREAEEAAMRAAE 119

Query: 116 NAARQKAEEEAKRRAEEEARRQPAAAQPAGTEAVAAPAAPVEAVREAAPVAAAPAPAADA 175
             A+++AEE A+R AEE+A+R+  A + A  EA A   A  +A RE     AA  P +D 
Sbjct: 120 EQAKREAEEAAQRAAEEKAKRE--AEEAAKREAEAKRMAEEKAKRETQ---AATQPRSDE 174

Query: 176 RK-RDEPRRPD----KPRADDNNRRGGGGDGER----------KNAPHRASVKE------ 214
            K + E  R +    K R ++  RR    +  R          KN    ++ KE      
Sbjct: 175 EKLKQEAARKEAEALKRRQEEEARRKAEEESRRQLEKVRELAEKNGERWSADKETVGDMQ 234

Query: 215 --------------------------------KAPAPRVAPRTTDEESDGFRRGGRG--K 240
                                           KA   +++ R  ++E D   RGG+   K
Sbjct: 235 ENTDYHVTTSRYAREAEDEADLHEEGARRRSTKANKRKMSSRDDNQERDSRPRGGKAGRK 294

Query: 241 AKLKKRNA--HGFQSPTGPVVREVKIGETITVGDLAQQMSVKAAEIIKFMFKLGTPATIN 298
            ++ K  +  HGF         +V +GETI V +LAQ+MSVKA E+IK M K+G  ATIN
Sbjct: 295 GRINKPMSMQHGFDKTAVVAKADVVVGETIVVSELAQKMSVKATEVIKVMMKMGAMATIN 354

Query: 299 QVLDQETAQLVAEELGHKVTLVSDTALEDSLAESLKFEGEAVSRAPVVTVMGHVDHGKTS 358
           QV+DQETAQLVAEE+GHKV L  +  LE+++      + E VSRAPVVT+MGHVDHGKTS
Sbjct: 355 QVIDQETAQLVAEEMGHKVVLRKENELEEAILSDRDDKFEEVSRAPVVTIMGHVDHGKTS 414

Query: 359 LLDYIRRAKVAAGEAGGITQHIGAYHVETDRGMVTFLDTPGHAAFTAMRARGAKATDIVI 418
            LDYIRR  VA+GEAGGITQHIGAYHVET  GM+TFLDTPGHAAFTAMRARGA+ATDIV+
Sbjct: 415 TLDYIRRTHVASGEAGGITQHIGAYHVETPNGMITFLDTPGHAAFTAMRARGAQATDIVV 474

Query: 419 LVVAADDGVMPQTIEAVQHAKAAGVPLVVAVNKIDKPGADLDRIRSELSVHGVTSEEWGG 478
           LVVAADDGVMPQT+EA+QHAKAAGVPL+VAVNKIDK  A+ D +++ELS + V  EEWGG
Sbjct: 475 LVVAADDGVMPQTVEAIQHAKAAGVPLIVAVNKIDKDTANPDNVKTELSQYNVMPEEWGG 534

Query: 479 DTPFVPVSAKMGTGVDELLEAVLLQAEVLELTATPSAPGRGVVVESRLDKGRGPVATVLV 538
           D  FV +SAK GT +D LLEA+LLQAEVLEL A       GVV+ESRLDKGRGPVATVLV
Sbjct: 535 DNMFVHISAKQGTNIDGLLEAILLQAEVLELKAVKQGMASGVVIESRLDKGRGPVATVLV 594

Query: 539 QDGTLRQGDMVLVGSNYGRVRAMLDENGKPIKEAGPAIPVEILGLDGTPDAGDEMSVVAD 598
           Q GTLR+GD+VL G  YGRVRAM DE G  ++EAGP+IPVEILGL G P AGDE +VV D
Sbjct: 595 QSGTLRKGDIVLCGQEYGRVRAMRDEVGNEVEEAGPSIPVEILGLSGVPAAGDEATVVRD 654

Query: 599 EKKAREVALFRQGKFREVKLARAHAGKLENIFENMGQEEKKTLNIVLKSDVRGSLEALNG 658
           E+KAREVA +R GKFREVKLAR    KLEN+F NM   +   LNIVLK+DV+GS+EA+  
Sbjct: 655 ERKAREVANYRAGKFREVKLARQQKSKLENMFSNMTAGDVAELNIVLKADVQGSVEAIAD 714

Query: 659 ALNGLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEQEGLDMR 718
           +L  L  DEV+V +VG GVGGITE+DA LA ASNA++ GFNVRADA AR+++E E +D+R
Sbjct: 715 SLTKLSTDEVKVNIVGSGVGGITETDAVLAAASNAIVVGFNVRADASARRMIEAENIDLR 774

Query: 719 YYNVIYDIIEDVKKALTGMLGSDVRENILGIAEVRDVFRSPKFGAIAGCMVVEGVVHRNR 778
           YY++IY +I++VK+A++GML  + ++ I+G+AEVRDVF+SPK GAIAGCMV EGV+ RN 
Sbjct: 775 YYSIIYQLIDEVKQAMSGMLSPEFKQEIIGLAEVRDVFKSPKLGAIAGCMVTEGVIKRNA 834

Query: 779 PIRVLREDIVIFEGELESLRRFKDDASEVRAGMECGIGVKSYNDVKVGDKIEVFEKVQVA 838
           PIRVLR+++VI+EGELESLRRFKDD +EV+ G ECGIGVK+YNDV+VGD+IEVFE +++ 
Sbjct: 835 PIRVLRDNVVIYEGELESLRRFKDDVAEVKNGYECGIGVKNYNDVRVGDQIEVFETIEIQ 894

Query: 839 RSL 841
           R++
Sbjct: 895 RTI 897