Pairwise Alignments

Query, 841 a.a., translation initiation factor IF-2 from Pseudomonas simiae WCS417

Subject, 601 a.a., translation initiation factor IF-2 from Methanococcus maripaludis S2

 Score =  162 bits (410), Expect = 5e-44
 Identities = 159/559 (28%), Positives = 249/559 (44%), Gaps = 109/559 (19%)

Query: 342 RAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETDR---------GM- 391
           R P+V+V+GHVDHGKTSLLD IRR +V   EAGGITQHIGA  +  +          G+ 
Sbjct: 7   RCPIVSVLGHVDHGKTSLLDKIRRTRVTQREAGGITQHIGASEIPINTIKKVSKDLLGLF 66

Query: 392 --------VTFLDTPGHAAFTAMRARGAKATDIVILVVAADDGVMPQTIEAVQHAKAAGV 443
                   +  +DTPGH AFT++R RG    DI ILVV  ++G  PQTIEA+   K    
Sbjct: 67  KADLSIPGILVIDTPGHEAFTSLRKRGGALADIAILVVDINEGFKPQTIEAINILKQCKT 126

Query: 444 PLVVAVNKIDK-PGAD---------------------------LDRIRSELSVHGVTSEE 475
           P VVA NK+D+ PG +                            + +   L+  G  ++ 
Sbjct: 127 PFVVAANKVDRIPGWNSSEGPFILNFNEKNQHPNAMTEFEIRLYENVIKHLNELGFDADL 186

Query: 476 WG--GDTP----FVPVSAKMGTGVDELLEAVL-LQAEVLELTATPSAPG--RGVVVESRL 526
           +    DT      VPVSA  G GV +LL  +  L    LE     +  G  +G V+E + 
Sbjct: 187 FSRVKDTTKTINVVPVSAMTGEGVPDLLVIISGLAQRFLEQKLALNVEGYAKGTVLELKE 246

Query: 527 DKGRGPVATVLVQDGTLRQGDMVLVGSNYG----RVRAML-----------DENGKPIKE 571
           +KG G     ++ DG  + GD ++VG+  G    +++A+L            +  KP K+
Sbjct: 247 EKGLGKTIDAIIYDGIAKTGDFLVVGNPDGVLVSKIKALLKPKELDEMRDPKDKFKPSKQ 306

Query: 572 AGPAIPVEILGLDGTPDAGDEMSVVADEKKAREVALFRQGKFREVKLARAHAGKLENIFE 631
              A  V+I        A D  SV+A           R     +V+ A+    +    F 
Sbjct: 307 ISAATGVKI-------SAPDLDSVIAGSP-------LRIVPKNQVEAAKEEVLEEVEEFT 352

Query: 632 NMGQEEKKTLNIVLKSDVRGSLEALNGALNGLGNDEVQVRVVGGGVGGITESDANLALA- 690
            +  +E     I++K+D  GSLEAL   L      +V  ++    VG I++ D   A + 
Sbjct: 353 ILTDDE----GIIIKADTMGSLEALANELR-----KVNAKIKKAEVGDISKKDVIEASSY 403

Query: 691 -----SNAVLFGFNVRADAGARKIVEQEGLDMRYYNVIYDIIEDVK---KALTGMLGSDV 742
                 N ++  FN +  A A+  +E+  + +    +IY ++E+ +   K +  ++ SD 
Sbjct: 404 ASTNPLNGLIISFNTKVLADAKAEIEKSDVKLLEGKIIYKLVEEHEEWTKEMEELMKSDE 463

Query: 743 RENILGIAEVR----DVFRSPKFGAIAGCMVVEGVVHRNRPIRVLREDIVIFEGELESLR 798
              +   A ++     +FR  K  A+ G  V+ G +    PI  + ED        E   
Sbjct: 464 INRLTKPAMIKILPNCIFRQ-KEPAVCGVEVLYGTLKIGSPI--MSEDGKKLGYVKEMRD 520

Query: 799 RFKDDASEVRAGMECGIGV 817
             +++  E + GM+  + +
Sbjct: 521 NQQENIKEAKVGMQVPVSI 539