Pairwise Alignments

Query, 701 a.a., polynucleotide phosphorylase/polyadenylase from Pseudomonas simiae WCS417

Subject, 238 a.a., ribonuclease PH from Vibrio cholerae E7946 ATCC 55056

 Score = 57.4 bits (137), Expect = 7e-13
 Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 28/217 (12%)

Query: 316 RIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGEKKD 375
           R D R    VRP+ I         GS L   G T+ L  A++    +  +   L+G+ K 
Sbjct: 2   RPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASI----EEGVPRWLKGQGKG 57

Query: 376 PFMLHYNFPPFSVGECGRM----GGAGRREIGHGRLARRSIAAMLPAADVFPYTIRVVSE 431
                Y   P +     R     G  G R +   RL  RS+ A++    +    I V  +
Sbjct: 58  WVTAEYGMLPRATHSRTRREATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDCD 117

Query: 432 ITESNGSSSMASVCGASLALMDAGV-----------PMKAPVAGIAMGLVKEGEKFAILT 480
           + +++G +  AS+ GAS+AL DA             PMK  VA +++G++ E     +L 
Sbjct: 118 VIQADGGTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGED----VLC 173

Query: 481 DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITE 517
           D+   ED   D D  V  T +G       I+I+G  E
Sbjct: 174 DLEYVEDSAADTDMNVVMTEEGKM-----IEIQGTAE 205