Pairwise Alignments

Query, 701 a.a., polynucleotide phosphorylase/polyadenylase from Pseudomonas simiae WCS417

Subject, 568 a.a., ribosomal protein S1 from Dechlorosoma suillum PS

 Score = 53.5 bits (127), Expect = 3e-11
 Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)

Query: 614 LGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLS-DARVEKVTDILKEGQE 672
           +GI+     G    GKV  + D+GAFV I  G +GLVH+S +    +    T +++ G E
Sbjct: 275 VGISRRYPSGTRLFGKVTNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPTKVVQLGDE 334

Query: 673 VEVLVLDVD-NRGRIKLSIKDVAA 695
           VEV++L++D +R RI L +K   A
Sbjct: 335 VEVMILEIDEDRRRISLGMKQCLA 358



 Score = 48.1 bits (113), Expect = 1e-09
 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 5/92 (5%)

Query: 603 KEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARVEK 662
           +E     R+++L    E   G    G V+ I D+GAFV+ L G DGL+HI+ L+  RV  
Sbjct: 182 EETMGEEREKLLSTLQE---GATVKGIVKNITDYGAFVD-LGGIDGLLHITDLAWRRVRH 237

Query: 663 VTDILKEGQEVEVLVLDVD-NRGRIKLSIKDV 693
            +++L  G EV   VL  D  + R+ L +K +
Sbjct: 238 PSEVLAVGDEVTAKVLKFDTEKNRVSLGLKQL 269



 Score = 46.6 bits (109), Expect = 3e-09
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 628 GKVERIVDFGAFVNILPGKDGLVHISMLS-DARVEKVTDILKEGQEVEVLVLDVD-NRGR 685
           G+++ I DFG F+ +    DGLVH+S LS     E+     K+G EV+ +VL +D ++ R
Sbjct: 376 GQIKSITDFGVFIGLPGNIDGLVHLSDLSWSTTGEEAIRNFKKGDEVQAVVLAIDTDKER 435

Query: 686 IKLSIKDV 693
           I L IK +
Sbjct: 436 ISLGIKQL 443



 Score = 36.6 bits (83), Expect = 3e-06
 Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 637 GAFVNILPGKDGLVHISMLSDARVEKVTDILKEGQEVEVLVLDVDNRGR-IKLSIK 691
           GA + +    +G +  S  S  RVE ++ ++K G E+E ++++VD + R + LSIK
Sbjct: 472 GAVLQLEGDVEGYLRASEYSRDRVEDLSQLVKVGDELEAMIINVDRKSRNVNLSIK 527