Pairwise Alignments

Query, 338 a.a., SAM-dependent methyltransferase from Pseudomonas simiae WCS417

Subject, 708 a.a., ribosomal RNA large subunit methyltransferase K/L from Vibrio cholerae E7946 ATCC 55056

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 41/288 (14%)

Query: 25  QGSDCYRLFHGSQEGAGGLTVDRYGPQLLVQSFHHPLETAE------LLDLHQQVNQCLG 78
           +G DC+RL+         + +D Y   L++Q +  P +  E      L D+ +   Q L 
Sbjct: 418 EGLDCFRLYDADLPEYN-VAIDVYQDHLMIQEYAAPKDIPEEKAKRRLTDIIRAAIQVLD 476

Query: 79  LE---LLLVYNDRSRGNSRIDRDDTVYRAEPAALEDLVGHEWGLNYRVRGRHAGQDPLLF 135
           ++   ++L   +R +G S+ ++       + A    +   E+G+   V   +   D  LF
Sbjct: 477 VDANNVVLKVRERQKGTSQYEK-----LGQQAQTMQIT--EYGVKLIVN-LYDYLDTGLF 528

Query: 136 LDLRNTRGWVKAHSAGKSVLNLFAYTCGVGLSAAAGGAREVCNLDFAEGNLAVGRENGLL 195
           LD + TR  +   + GK  LNLFAYT    + AA GGA+    +D ++  L   +EN  L
Sbjct: 529 LDHKITRRRLGQMAQGKDFLNLFAYTGSATVHAACGGAKSTTTVDMSKTYLEWAKENMQL 588

Query: 196 NPQLPTM-EFVQSDYFPAIRQLAGLPITQRRGQKLPSYPRLEQRQYDLVLLDPPAW--AK 252
           N Q+    ++VQ+D    ++ LA                   Q QYDL+ +DPP +  +K
Sbjct: 589 NGQVGRQHQYVQAD---CLQWLAN-----------------AQSQYDLIFIDPPTFSNSK 628

Query: 253 SAFGTVDLLRDYQSLLKPALLATADNGVLICCNNLAKVSMEDWREHVL 300
               T D+ RD+ +L+          G ++  NN     M+    H L
Sbjct: 629 RMEQTFDVQRDHVTLMTNLKRLLRPEGTIVFSNNKRHFKMDMEALHAL 676