Pairwise Alignments

Query, 338 a.a., SAM-dependent methyltransferase from Pseudomonas simiae WCS417

Subject, 305 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  106 bits (265), Expect = 7e-28
 Identities = 87/277 (31%), Positives = 134/277 (48%), Gaps = 37/277 (13%)

Query: 31  RLFHGS---QEGAGGLTVDRYGPQLLVQSFHHPLETAELLDLHQQVNQCLGLE-----LL 82
           RLFHG     EGA  L +D + P LL+ SF   ++ A L +L Q +      E       
Sbjct: 19  RLFHGRGGRYEGAEHLCLDWFPPVLLLTSFKE-IDEAALEELTQAIQARWREEQGEQGFN 77

Query: 83  LVYNDRSRGNSRIDRDDTVYRAEPAALEDLVGHEWGLNYRVRGRHAGQDPLLFLDLRNTR 142
           LV+  R  G ++      +Y   P   E  +  E G  +++     GQ+  LFLD+R  R
Sbjct: 78  LVFQHRCAGQTQTH---LLYGEVP---EPHLVSENGARFQIHLLR-GQNHGLFLDMRAGR 130

Query: 143 GWVKAHSAGKSVLNLFAYTCGVGLSAAAGGAREVCNLDFAEGNLAVGRENGLLNPQLPTM 202
            WVKA++A  +VLNLFAYTCG  + A  GGA +V N+D ++G LA+G++N LLN      
Sbjct: 131 AWVKANAAQANVLNLFAYTCGFSVMALQGGADQVVNIDMSKGALAIGKQNHLLNEFPHGA 190

Query: 203 EFVQSDYFPAIRQLAGLPITQRRGQKLPSYPRLEQRQYDLVLLDPPAWAKSAFGTVDLLR 262
            F+  D F +  +L                   +   YDL++ DPP+  + +F      +
Sbjct: 191 RFLGHDIFKSWGKLT------------------KMGPYDLIIADPPSNQRGSFVAT---K 229

Query: 263 DYQSLLKPALLATADNGVLICCNNLAKVSMEDWREHV 299
           DY  LL+      A  G ++ C N  ++ ++  ++ V
Sbjct: 230 DYARLLRRLPQLLAPQGEVLLCLNAPELGIDFLKQQV 266