Pairwise Alignments

Query, 475 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  288 bits (736), Expect = 4e-82
 Identities = 169/388 (43%), Positives = 244/388 (62%), Gaps = 22/388 (5%)

Query: 3   HILIVEDETIIRSALRRLLERNQYQV---SEAGSVQEAQERFSIPTFDLIVSDLRLPGAP 59
           ++ +V+D++ IR  + + L     +    ++A SV  A ER    T D++VSD+R+PG  
Sbjct: 5   YVWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALER---ETPDVLVSDIRMPGMD 61

Query: 60  GTELI-KLGQGTP---VLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRD 115
           G  L+ ++ Q TP   V+IMT+++ L +AV++ + GA +Y+ KPFD DE L  V R +  
Sbjct: 62  GIALLNQVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAH 121

Query: 116 RQSPSSAPAEQRPAGKAADKPGVDNSNGEIGIIGSCPPMQDLYGKIRKVAPTDSNVLIQG 175
            Q       EQR   K + +P  + S  EI  IG  P MQ+++  I +++ +  +VLI G
Sbjct: 122 GQ-------EQR---KTSHRPSENYSAPEI--IGEAPAMQEVFRAIGRLSRSSISVLING 169

Query: 176 ESGTGKELVARALHNLSKRAKAPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLV 235
           ESGTGKELVA ALH  S RA+ P I++N AAIP+ LIESELFGHEKGAFTGA+  R G  
Sbjct: 170 ESGTGKELVAHALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRF 229

Query: 236 EAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLA 295
           E A+GGTLFLDEIG++PL+ Q RLLRVL +G+  RVG   + KVDVR++AATH++L+ L 
Sbjct: 230 EQANGGTLFLDEIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLV 289

Query: 296 KIGQFREDLYYRLHVIALKLPALRERGADVNEIAHAFLLRQSARINRTDLKFAPDAEQAI 355
             G+FREDL++RL+VI + +P+LRER  D+ ++   FL   +  +        P     +
Sbjct: 290 HQGKFREDLFHRLNVIRIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDIL 349

Query: 356 RHYSWPGNVRELENAVERAVILSESPEI 383
               WPGNVR+LEN      +++   E+
Sbjct: 350 TKLDWPGNVRQLENMCRWLTVMASGSEV 377