Pairwise Alignments

Query, 345 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

 Score =  210 bits (535), Expect = 4e-59
 Identities = 124/283 (43%), Positives = 174/283 (61%), Gaps = 10/283 (3%)

Query: 61  ILGQIRLPRTLLGLAVGGVLALSGVAMQGLFRNPLADPGLVGVSSGAALGAAVAIVGGSF 120
           ++ ++RLPR L    +G  LA++G  +Q L  N LA+PG+VGVS GA++   + ++   F
Sbjct: 57  LVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAEPGVVGVSGGASVAMVILLL---F 113

Query: 121 FGGLPDAFGPYLLSFCAFLGGLGVTALVYRLGRRNGQTNVATMLLAGIALTALASSAVGL 180
           F   P    P      A LG L  T L+  + R+   T  A +LL G+AL  L+ + V  
Sbjct: 114 F---PSLNSPVAFMAAAVLGALLFTLLLVVMARKLRLTT-ARLLLVGVALGILSGAVVTW 169

Query: 181 FTYLADDATLRTLTFWNLGSLNGAS-YSRLWPLLLVSAGVAMWLPRRAKALNALLLGESE 239
             Y +DD  LR L +W +GS+ G S Y  L  L LV+  V +WL  +   L+ L+LGE  
Sbjct: 170 AFYFSDDLGLRQLMYWLMGSVAGVSWYQHL--LSLVAVPVVIWLVLQGGVLDKLMLGEGH 227

Query: 240 ANHLGIDVEGLKRELVFCTALGVGAAVAAAGMIGFVGLVVPHLVRLLAGPDHRVLLPASV 299
           A  LGID+  ++  L+   AL VGA+VA  G+IGFVGLVVPHL+RL  G ++R+LLP S 
Sbjct: 228 AKQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVPHLLRLTLGSENRLLLPLSA 287

Query: 300 LAGASLLLFADLVARLALAPAELPIGIVTAFIGAPFFLYLLLR 342
           L GA LL+ ADL+ARLAL   ELP+G+VT  +GAP F+++L+R
Sbjct: 288 LCGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFIWMLVR 330