Pairwise Alignments

Query, 345 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 347 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  175 bits (444), Expect = 1e-48
 Identities = 122/337 (36%), Positives = 178/337 (52%), Gaps = 26/337 (7%)

Query: 14  LALLCVL--AIWLSLALGPVSLP---LLDTLKAALRLMGLPIEAQGLEQAELILGQIRLP 68
           LA L +L  A+W+  A+G  ++P   +  T+   L   G P+        E I+   RL 
Sbjct: 20  LAALVILFAALWMGAAIGETAIPFKTVAQTVANRLWNAGYPLAPID----EGIIWSYRLS 75

Query: 69  RTLLGLAVGGVLALSGVAMQGLFRNPLADPGLVGVSSGAALGA-AVAIVGGSFFGGLPDA 127
           R ++  + G  LALSG  +Q L RNPLADP ++G+S+GA+ GA +VAI+G          
Sbjct: 76  RAVVAASCGASLALSGAVLQSLLRNPLADPYILGISAGASTGAVSVAILGVGA------- 128

Query: 128 FGPYLLSFCAFLGGLGVTALVYRLGRRNGQTNVATMLLAGIALTALASSAVG-LFTYLAD 186
            G   L   AF+G L    LV  L  + G+   A ++LAG+A + L ++    + T  A 
Sbjct: 129 -GMLTLPLGAFIGALVAFVLVSLLAVKAGR-GTAAIILAGVAGSQLFNALTSFIVTKAAT 186

Query: 187 DATLRTLTFWNLGSLNGASYSRLW---PLLLVSAGVAMWLPRRAKALNALLLGESEANHL 243
               R + FW LG+L+G  +   W   P  L+   V +W    A+ L+A   G   A  L
Sbjct: 187 AEQARGIMFWLLGNLSGVRWPDAWLAVPATLLGLVVCLW---HARPLDAFTFGSESAASL 243

Query: 244 GIDVEGLKRELVFCTALGVGAAVAAAGMIGFVGLVVPHLVRLLAGPDHRVLLPASVLAGA 303
           GI V      LV  +A+     V+  G IGFVGLV+PH  R+L G  H VLLPA+ L GA
Sbjct: 244 GISVRRTYFALVGVSAMMTAVMVSIVGSIGFVGLVIPHAARMLVGVRHGVLLPAAALIGA 303

Query: 304 SLLLFADLVARLALAPAELPIGIVTAFIGAPFFLYLL 340
             ++ AD+++R+ +    LPIG++TA +GAP F  +L
Sbjct: 304 VFMILADILSRVLIPGQVLPIGVITALVGAPAFALIL 340