Pairwise Alignments

Query, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

Subject, 749 a.a., PBP1A family penicillin-binding protein from Synechocystis sp000284455 PCC 6803

 Score =  202 bits (515), Expect = 4e-56
 Identities = 162/557 (29%), Positives = 268/557 (48%), Gaps = 50/557 (8%)

Query: 173 LDQVPPYLLETLVAVEDRDFYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQLVKNFY 232
           L    PYL + ++A ED  FY H+GV P  + RA+++N     + QG STLTQQL ++ +
Sbjct: 213 LSDFSPYLPQAVIASEDTRFYWHFGVDPYGLGRAIYINLQDRDVKQGASTLTQQLARSLF 272

Query: 233 --LTNERSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFFF 290
             +  E +  RK+ E  +A+ LE  YSK +IL+AYLN V++G       +GF  A+QF+F
Sbjct: 273 SEVGRENTAGRKIREMFVALKLEAVYSKDDILKAYLNRVYLGAGN----YGFEDAAQFYF 328

Query: 291 GQPLSELKLHQVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAAK 350
            +   +L + + A LV M+  P+ YNP ++ + +++ RN V++ +   G+   ++   A+
Sbjct: 329 DKSAQDLDVGEAATLVAMLPAPNLYNPVQDYQTSVQLRNRVIERMAMLGMIDEQEANRAR 388

Query: 351 KMPLGVTTRG--KLADSSFPGFIDLVKRQLREDYRDEDLTEEG-LRIFTSFDPILQMKAE 407
           +  + V+ +    L+    P F   +  +L      ED+ +EG   + TS +  +Q  AE
Sbjct: 389 RSRIQVSPKATQTLSQRQAPYFYGYIFGELNH-LLGEDVAKEGNFVVETSLNLKMQALAE 447

Query: 408 ASVNDTFKRLTGRKGSDEVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSL 467
            S+   F    G+K +   + A+V  +  TG V AM+G +    + FNRA  A R  GS 
Sbjct: 448 KSL-QKFLTTEGKKYAVS-QGAVVTLDSRTGAVLAMVGGKSYRESQFNRASQAQRQPGST 505

Query: 468 VKPAVYLTALEKPSKYTLTSWLSDDPLSVKGGDGQVWTPQNFD--RRSHG--TVFLYQGI 523
            K   Y  A+ K    +        P +        W  QN+    RS     +   +G 
Sbjct: 506 FKLFAYTAAIAK--GVSTNQAFECGPFT--------WQGQNYKPCERSGAAPAITFAEGF 555

Query: 524 AHSYNISTSRLGLEVGVPNVLKTIARLGVTREFPAFPSILLGAGAMTPMEVATMYQTLAN 583
           A S N+   R+   VG+  ++      GV       P ++LG      +E+   Y  +AN
Sbjct: 556 AQSENVVALRVAQTVGLDEIIALAKDFGVNSSLVKEPGLVLGQSEARVLEMTGAYGAIAN 615

Query: 584 GGFNTPMRGIRSVLTA----EGEPLK--RYPFQIQQRFDAGSIYLIQNA--------MQR 629
           GG      GI ++       + E LK  R  +Q+ Q    G   ++  A        +Q 
Sbjct: 616 GGVWNRPHGIVNIRDGGDCPDPEQLKSCREVYQVSQD-GRGQKQVVSPAIAATMTQLLQA 674

Query: 630 VMREGTGRSVYSVLPANLTLAGKTGTSNDSRDSWFAGF--GQDVLAVVWLGRDDNGKTPF 687
            +  GTG++           AGKTGT++ + D WF GF   ++++  +WLG DD+  +P 
Sbjct: 675 AVTNGTGKAA----DIGYGTAGKTGTTDKAVDLWFIGFLPQKNLVTGIWLGNDDS--SPT 728

Query: 688 TGATG-ALQVWTSFMRK 703
            G++G A  +W  +MR+
Sbjct: 729 QGSSGLAATLWGQYMRQ 745