Pairwise Alignments

Query, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

Subject, 740 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  233 bits (594), Expect = 3e-65
 Identities = 165/553 (29%), Positives = 265/553 (47%), Gaps = 47/553 (8%)

Query: 173 LDQVPPYLLETLVAVEDRDFYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQLVKNF- 231
           L    P L + L+A ED  FY H G+ P   ARA+  N   G++ +G STLTQQ+ ++  
Sbjct: 210 LSDFSPVLPKALLASEDSRFYWHLGIDPYGTARAILTNFRSGEVREGASTLTQQIARSLF 269

Query: 232 --YLTNERSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFF 289
             Y+  E S+ RK+ EA++A+ LE  YSK E+L  YLN V++G       +GF  A+Q +
Sbjct: 270 SDYVGREDSIGRKVREAILALKLEFFYSKDELLRTYLNRVYLG-----VGYGFEDAAQIY 324

Query: 290 FGQPLSELKLHQVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAA 349
           FG+   +L   + ALLVG++  P+ ++P  N   A  ++N V++ ++  G+ + E+   A
Sbjct: 325 FGKSARDLSTSEAALLVGLLPSPNGFSPCTNLAAAQRQKNGVIERMQSLGLISEEEARTA 384

Query: 350 KKMPLGVTTRGKLADS--SFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAE 407
           ++ P+ +        S  + P +   V  +L +   D  + E    + TS +P +Q  AE
Sbjct: 385 RRSPVTIKPEACQTSSRVTAPYYYGAVVEELAQLVGDTVVEEGNFAVETSLNPAMQTAAE 444

Query: 408 ASVNDTFKRLTGRKGSDEVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSL 467
            S+     +  G K     + A+V  +   GE++A++G      + F+RA  A R  GS 
Sbjct: 445 QSLQSLLAQTAGVK-----QGAIVTIDSRNGEIRALVGGVDYQASQFDRATQAYRQPGST 499

Query: 468 VKPAVYLTALEKPSKYTLTSWLSDDPLSVKGGDGQVWTPQNFD--RRSHGTVFLYQGIAH 525
            K   Y  ALE+    +        PL        VW  Q F    RS G++ L + +A 
Sbjct: 500 FKVFAYAAALEQ--GISAGRPYDCSPL--------VWQGQQFRGCERSSGSIDLARALAQ 549

Query: 526 SYNISTSRLGLEVGVPNVLKTIARLGVTREFPAFPSILLGAGAMTPMEVATMYQTLANGG 585
           S N    R+  EVG+  V++   + G+  +    P ++LG   +T +E+ + +  +AN G
Sbjct: 550 SENAVALRVAREVGLDAVVQMARKFGIKADLQPVPGLVLGQSEVTLLEMTSAFAAIANEG 609

Query: 586 FNTPMRGIRSV------LTAEGEPLKRYPFQIQQR-------FDAGSIYLIQNAMQRVMR 632
              P   IR +       TAE        F +QQ+         A +   +   +Q+ + 
Sbjct: 610 RWNPPHAIRRIYDSSRCTTAEQRRSCTLTFDVQQQPRRDRVVISAATAATLTAMLQQAVS 669

Query: 633 EGTGRSVYSVLPANLTLAGKTGTSNDSRDSWFAGF--GQDVLAVVWLGRDDNGKTPFTGA 690
            GTG             AGKTGT+ND  D WF GF   + ++  VWLG DDN  T  + +
Sbjct: 670 SGTG----GAAAIGYGAAGKTGTTNDGVDLWFVGFVPSRHLVTGVWLGNDDNQPTGNSSS 725

Query: 691 TGALQVWTSFMRK 703
             A Q+W  +M +
Sbjct: 726 LAA-QLWGDYMAR 737