Pairwise Alignments

Query, 689 a.a., exodeoxyribonuclease V subunit alpha from Pseudomonas simiae WCS417

Subject, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score =  412 bits (1060), Expect = e-119
 Identities = 291/732 (39%), Positives = 400/732 (54%), Gaps = 106/732 (14%)

Query: 22  QLLERWVDRGWLRALDKAFVGFLHELD-------PQADPLVLLAAALTSHQLGHGHVCLD 74
           ++ +R + +G LR LD  F  F+ +          +++ L +L+AAL++ +LG GH+CL 
Sbjct: 7   EVAKRLLAQGALRPLDVQFARFIGKQAVLAGHNAAESELLSVLSAALSA-ELGRGHICLP 65

Query: 75  LFETL-KAPDFALSLPPEGDLQTGAMLLPSQLLDGLDGAHWCHALAASHLVALAVDGRES 133
           L +      D A  +   G+    A L  S+    +D   W   L AS LV       + 
Sbjct: 66  LCDAQGNRCDLAALIGLYGE----ASLQHSERWLAVD---WQALLQASPLVG------QQ 112

Query: 134 AQSRPLVLSGKRLYLRRYWTYER-------------------------RIDTA------- 161
            ++ PL+  G RLYL RYW YE+                         R++T        
Sbjct: 113 GEAVPLMFDGSRLYLHRYWHYEKQLAARLTELAAPQRLSPAELANLRERLNTLFARDYLG 172

Query: 162 ------------------LRLRLATQESVAADLP---------QR---LNSLFDQPPPDG 191
                             L  RL   ES A D P         QR   L +L    P   
Sbjct: 173 LWQALQQKPLSSVERIQLLNDRLDVVESDALDWPAIEAVVEKAQRAADLQALEQLIPLTH 232

Query: 192 VIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVEVGSPLRIRLAAPTGK 251
            ++WQK+A A+A    F++++GGPGTGKTTTV +LLA L + ++  G    I+L APTGK
Sbjct: 233 CLNWQKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGK 292

Query: 252 AAARLTESISQQVLSLKVPDSVKEKIPTQVTTVHRLLGSRPGTRHFRHHIGNPLPLDVLV 311
           AAARLTES+ + V  L +   +   IP+  +T+HRLLG+ PG+  FRHH  NPL LD+LV
Sbjct: 293 AAARLTESMGKAVSQLAIEPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPLHLDLLV 352

Query: 312 VDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRDAEAGFYSAETR 371
           VDEASM+DL +M  L++ALP HARL+LLGDKDQLASVEAGAVLGD+C     G Y  E  
Sbjct: 353 VDEASMVDLPLMVKLVEALPKHARLILLGDKDQLASVEAGAVLGDICTFLNQG-YGHEQG 411

Query: 372 QWLQAVSGEDLSASGLQEDLDGSHPLAQQVVMLRYSRRFGEGSGIGQLARWVNQQNPEEA 431
             L  ++G    A+  Q      +P+A  + ML+ S RF   SGIGQLA+ +N  +P   
Sbjct: 412 AQLAELTG---FATLRQTASKTVNPVADCLCMLQKSYRFDARSGIGQLAKAINSGSPARV 468

Query: 432 RKLFAARSHDDLFCVSLKGEH-DHALERLVLDGQGEGAEGYRYYLNLLQSARPSPETPRE 490
             ++  +S  D+   +L GEH    L+ LV        + YR YL+LL   +P+ +    
Sbjct: 469 EAVW-QQSFSDIEHFALSGEHYQQLLQTLV--------QAYRPYLSLLN--QPTEQFEST 517

Query: 491 SDAWTHWAQQLLQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIDGDEQ-WYEGRP 549
             +    A+  L AF   +LLCA+R+G +GV GLN RI  AL   +LI   E+ WY GRP
Sbjct: 518 QQSMLTLAKSALDAFSRCRLLCALREGDFGVMGLNTRIERALNAHKLIKTQEEIWYHGRP 577

Query: 550 VLMTRNDYGLGLMNGDIGIALKLPESDGGPQVLRVAFPRNDGQGGVRFVLPSRLNDVETV 609
           +++TRND+GLGL NGDIG+ ++  + D G   L+V F   D  G ++ VLPSR+   ET 
Sbjct: 578 IMVTRNDHGLGLYNGDIGLCMRDRDDDQGR--LKVYFELPD--GSIKAVLPSRVPQHETA 633

Query: 610 YAMTVHKSQGSEFTHTALILPDALSPVLTKELIYTGITRAKRWFSLIEPRGGVFEEAVRR 669
           YAMT+HKSQGSEF  T LILP   SP+LT+EL+YTGITRAK+   L      V + A++ 
Sbjct: 634 YAMTIHKSQGSEFDLTLLILPPDYSPILTRELVYTGITRAKKQLKLY-CDNKVLQRAIKV 692

Query: 670 KVKRLSGLMLEL 681
           K +R SGL+  L
Sbjct: 693 KTQRASGLVARL 704