Pairwise Alignments

Query, 689 a.a., exodeoxyribonuclease V subunit alpha from Pseudomonas simiae WCS417

Subject, 631 a.a., exodeoxyribonuclease V (RefSeq) from Shewanella amazonensis SB2B

 Score =  410 bits (1055), Expect = e-119
 Identities = 278/673 (41%), Positives = 377/673 (56%), Gaps = 72/673 (10%)

Query: 24  LERWVDRGWLRALDKAFVGFLHELDPQADPLVLLAAALTSHQLGHGHVCLDLFETLKAPD 83
           L+ W  +G L ALD+ F   + EL     PL+LL   L S QL   H CLDL   +    
Sbjct: 18  LKLWQSQGELSALDRHFALQMAELHSDDSPLMLLMCVLVSRQLSRQHPCLDLSALMLGN- 76

Query: 84  FALSLPPEGDLQTGAMLLPSQLLDGLDGAHWCHALAASHLVALAVDGRESAQSRPLVLSG 143
                 P G  Q    +L       L GA        ++L A+        +++PL+L G
Sbjct: 77  ------PMGTRQAQLRILADY--PALLGA-------VANLDAVG----SPDENKPLILEG 117

Query: 144 KRLYLRRYWTYERRIDTALRLRLATQESVAADLPQRLNSLFDQPPPDGVIDWQKLACALA 203
           KRLYL+RY  +E R+   L     T+ S  A     L +LF  P     IDWQK+A A A
Sbjct: 118 KRLYLKRYQGFESRVAARLNAMAGTELSTHAHTAALLEALF--PVGKEAIDWQKIAVATA 175

Query: 204 TRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVEVGSPLRIRLAAPTGKAAARLTESI--- 260
                +++TGGPGTGKTTTV +LL LL      + S L IR+ APTGKAAARL+ESI   
Sbjct: 176 AGKQLTVITGGPGTGKTTTVTKLLLLLS-----LSSSLNIRMVAPTGKAAARLSESIKAS 230

Query: 261 ----SQQVLSLKVPDSVKEKIPTQVTTVHRLLGSRPGTRHFRHHIGNPLPLDVLVVDEAS 316
               +Q++ S  +       +P   +T+HRLLG +PG   FRHH  NPL LD+L+VDEAS
Sbjct: 231 KQRLTQELNSPLISQDAIASLPEDASTLHRLLGFQPGNHKFRHHRDNPLDLDLLLVDEAS 290

Query: 317 MIDLEMMANLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRDAEAGF-YSAETRQWLQ 375
           M+DL MM  LLDALP HARL+LLGD+DQLASVEAGAVL D+C  A  G+ YSA     ++
Sbjct: 291 MVDLPMMDRLLDALPGHARLILLGDQDQLASVEAGAVLADICEGARQGYRYSAVQTARIE 350

Query: 376 AVSGEDLSASGLQEDLDGSHPLAQQVVMLRYSRRFGEGSGIGQLARWVNQQNPEEARKLF 435
            ++G  L+    + D  G   L   +  L +S RF E +GIGQLA  VN+ + E+   ++
Sbjct: 351 GLTGTKLAP---RADAPG---LGDNLCRLLHSHRFAEDAGIGQLAMAVNEGDKEKVAAVW 404

Query: 436 AARSHDDLFCVSLKGEHDHALERLVLDGQGEGAEGYRYYLNLLQSARPSPETPRESDAWT 495
             +++ +L  +   G++   L  LV   +   +E   Y   + Q A P            
Sbjct: 405 -QKNYAELSWI--PGDNSDGLAALVQLAKSAYSE---YLQAMKQQAEP------------ 446

Query: 496 HWAQQLLQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIDGDEQWYEGRPVLMTRN 555
              + +LQ ++ F++LCA++ G +GV+G+N  ITAAL +  LI+  +++Y GRPV++  N
Sbjct: 447 ---KTILQKYNEFRVLCAMKNGEYGVDGINRAITAALARAGLIEPSQEFYAGRPVMIQSN 503

Query: 556 DYGLGLMNGDIGIALKLPESDGGPQVLRVAFPRNDGQGGVRFVLPSRLNDVETVYAMTVH 615
           DY LGL NGDIGI L +   +G  Q L   F ++DGQ  V  VLP+RL   ET YAMTVH
Sbjct: 504 DYSLGLFNGDIGILLPV---EGDNQRLMTHFIQSDGQ--VLKVLPARLPGHETCYAMTVH 558

Query: 616 KSQGSEFTHTALILPDALSP----VLTKELIYTGITRAKRWFSLIEPRGGVFEEAVRRKV 671
           KSQGSEF   AL LP   +P    ++ +ELIYT ITRAK  F+ +     +FE A +R+ 
Sbjct: 559 KSQGSEFASVALSLPPQPTPSQQSLIGRELIYTAITRAKSKFTCLGTE-ALFEAATQRRT 617

Query: 672 KRLSGLMLELGHE 684
           +R SGL   L HE
Sbjct: 618 ERASGLADRLWHE 630