Pairwise Alignments

Query, 689 a.a., exodeoxyribonuclease V subunit alpha from Pseudomonas simiae WCS417

Subject, 606 a.a., RecBCD enzyme subunit RecD from Enterobacter sp. TBS_079

 Score =  402 bits (1032), Expect = e-116
 Identities = 284/658 (43%), Positives = 366/658 (55%), Gaps = 65/658 (9%)

Query: 22  QLLERWVDRGWLRALDKAFVGFLHELDPQADPLVLLAAALTSHQLGHGHVCLDLFETLKA 81
           +LL   V++  LR LD  F   +       +P V+LAAA+ S   G GHVCL L   +  
Sbjct: 5   ELLLEAVEQRLLRHLDVQFAMMVSG----DEPAVMLAAAILSKDAGEGHVCLPLSRLVM- 59

Query: 82  PDFALSLPPEGDLQTGAMLLPSQLLDGLDGAHWCHALAASHLVALAVDGRESAQSRPLVL 141
                      D +  A L     L G +   W   L  S  V+ A          P++L
Sbjct: 60  -----------DEKMPAALQSCFALLG-ESVDWPTVLHRSPAVSAA------NSQTPMIL 101

Query: 142 SGKRLYLRRYWTYERRIDTALRLRLATQESVAADLPQRLNSLFDQPPPDGVIDWQKLACA 201
           +G RLYL R W  E  +        A      A L Q L++LF         DWQK+A A
Sbjct: 102 TGDRLYLNRLWRNELAVARFFSETNAPLPCDEAQLRQTLDTLFTSVE---ATDWQKVAAA 158

Query: 202 LATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVEVGSPLRIRLAAPTGKAAARLTESIS 261
           +A     S+++GGPGTGKTTTV +LLA L   + E     RIRLAAPTGKAAARLTES+ 
Sbjct: 159 VALTRRISVISGGPGTGKTTTVAKLLAALIQLSGE--QKCRIRLAAPTGKAAARLTESLG 216

Query: 262 QQVLSLKVPDSVKEKIPTQVTTVHRLLGSRPGTRHFRHHIGNPLPLDVLVVDEASMIDLE 321
             +  L +        P   +T+HRLLG++PG++  R+H GNPL LDVLVVDEASMIDL 
Sbjct: 217 GALQKLPLTGEQLALFPNDASTLHRLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLT 276

Query: 322 MMANLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRDAEAGFYSAETRQWLQAVSGED 381
           MMA L+DALP HAR++ LGD+DQLASVEAGAVLGD+C  A  G Y+AE  + L  ++G  
Sbjct: 277 MMARLIDALPAHARVIFLGDRDQLASVEAGAVLGDICTYASLG-YTAERAEELSRLTGCS 335

Query: 382 LSASGLQEDLDGSHPLAQQVVMLRYSRRFGEGSGIGQLARWVNQQNPEEARKLFAARSHD 441
           L++      L G+  L   + +L+ S RFG  SGIGQLA  VN+ +      +F  +  D
Sbjct: 336 LASE--NHSLAGA--LRDSLCLLQKSYRFGSDSGIGQLASAVNRGDRHTTCAVFDGQFTD 391

Query: 442 DLFCVSLKGEHDHALERLVLDGQGEGAEGYRYYLNLLQSARPSPETPRESDAWTHWAQQL 501
               +  K        + +LD   +  +GY+++L  +Q       TP           Q 
Sbjct: 392 ----IEKKSLQTGEEYQAMLD---DALQGYQHFLTGVQQQC----TP----------AQA 430

Query: 502 LQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLID--GDEQWYEGRPVLMTRNDYGL 559
           L AF  +QLLCA+R+GP+GV GLN R    L + R I+     +WYEGRPV++ RND  L
Sbjct: 431 LAAFGEYQLLCALREGPFGVSGLNDRFEQLLGQKRKINRTPHSRWYEGRPVMIARNDSAL 490

Query: 560 GLMNGDIGIALKLPESDGGPQVLRVAFPRNDGQGGVRFVLPSRLNDVETVYAMTVHKSQG 619
           GL NGDIGIAL     D G   LRV F   D  G V+ V PSRL + ET +AMTVHKSQG
Sbjct: 491 GLFNGDIGIAL-----DRG-LGLRVWFQMPD--GSVKSVQPSRLPEHETAWAMTVHKSQG 542

Query: 620 SEFTHTALILPDALSPVLTKELIYTGITRAKRWFSLIEPRGGVFEEAVRRKVKRLSGL 677
           SEF H ALILP  LSPV+T+ELIYT ITRA++  SL      V  +A+  + +R SGL
Sbjct: 543 SEFNHAALILPTQLSPVITRELIYTAITRARQRLSLYADE-RVLLQAIATRTERRSGL 599