Pairwise Alignments

Query, 420 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

Subject, 1484 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  134 bits (336), Expect = 2e-35
 Identities = 66/178 (37%), Positives = 106/178 (59%), Gaps = 1/178 (0%)

Query: 241  LAHQANHDSLTGLPNRAFFEGRLIRALRSAAKAKEQVAVLYLDSDRFKEINDSFGHAAGD 300
            L   AN+D LTGLPNR+ F  RL + +  A + ++++A+++LD DRFK +NDS+GH+ GD
Sbjct: 1052 LRRLANYDVLTGLPNRSLFAARLAKCIHRAEQTEDKLALIFLDLDRFKNVNDSYGHSMGD 1111

Query: 301  AVLVAVAERVRAQLREDDLVARLGGDEFAILLAPLHKAQDAERIADKIIASMDLPIPVPG 360
            A+LV  A R+++ + E+  + R GGDEF IL+  +    +   + + +I  ++ P  + G
Sbjct: 1112 ALLVEAASRLQSCVSENHTLCRFGGDEFVILMRDMVDIDEVNHLCEALIRQIEKPFELYG 1171

Query: 361  NTQVLTSLSIGIAIYPDHGATPGALLNAADAAMYQAKRLSSGGQQTAESEHSAANVQH 418
              +   S SIG++++PD    P  L+  AD AMY AK    G  Q   +E +A  + H
Sbjct: 1172 R-EFFISTSIGVSLWPDDAKQPEVLIKNADQAMYHAKEEGRGNFQYFSAERNAEALYH 1228