Pairwise Alignments

Query, 420 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

Subject, 1491 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  139 bits (351), Expect = 4e-37
 Identities = 72/178 (40%), Positives = 112/178 (62%), Gaps = 1/178 (0%)

Query: 241  LAHQANHDSLTGLPNRAFFEGRLIRALRSAAKAKEQVAVLYLDSDRFKEINDSFGHAAGD 300
            L   AN+D LTGLPNR+ F  RL++++++A +  E++A+L+LD DRFK +NDS+GH+ GD
Sbjct: 1053 LRRLANYDVLTGLPNRSLFSNRLMQSIQAAEQNGEKLALLFLDLDRFKHVNDSYGHSMGD 1112

Query: 301  AVLVAVAERVRAQLREDDLVARLGGDEFAILLAPLHKAQDAERIADKIIASMDLPIPVPG 360
            A+LV  + R+++ +  + L+ R GGDEF ILL  + +  D   +A++++A +  P  + G
Sbjct: 1113 ALLVEASNRLQSCIGSEHLLCRFGGDEFVILLKNVKELSDINHLAEQLLAQIVAPFRLFG 1172

Query: 361  NTQVLTSLSIGIAIYPDHGATPGALLNAADAAMYQAKRLSSGGQQTAESEHSAANVQH 418
              +   S SIGI+I+PD    P A +  AD AMY AK    G  +   SE +A  + H
Sbjct: 1173 R-EFYISTSIGISIWPDDAMQPEAFIKNADLAMYHAKEEGRGNFKYYSSERNAQALYH 1229