Pairwise Alignments

Query, 163 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 321 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score = 77.8 bits (190), Expect = 2e-19
 Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 9/136 (6%)

Query: 25  PPPKGLTPAQVAVLKQQGFELTDDGWAFGLSGKVLFGSDVETLNQPSTEIVQRIGKALLG 84
           P P      +VAV K   F+  D            F +    L   + + + +I   L  
Sbjct: 186 PAPVAAPVEKVAVTKTFTFQHLDSS---------TFATASAELKPATVQKLDKIVGYLNQ 236

Query: 85  VGIERVRVDGHTDASGKETYNQQLSLRRAKSVATVLTGVGMKEENIQLRGLGSSQPVASN 144
               +V V GHTD++G E YNQ+LS RRA++VA  L   G+    I  +GLG S P+ASN
Sbjct: 237 YPQAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKALEAQGIDASRISAKGLGESSPIASN 296

Query: 145 DTVAGRTENRRVSIVV 160
            T  GR +NRRV +V+
Sbjct: 297 ATAEGREKNRRVELVI 312