Pairwise Alignments

Query, 282 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 300 a.a., Membrane transporters of cations and cationic drugs from Phaeobacter inhibens DSM 17395

 Score =  111 bits (278), Expect = 2e-29
 Identities = 73/281 (25%), Positives = 138/281 (49%), Gaps = 7/281 (2%)

Query: 7   AITLVLISAFMHATWNAVVRAGSSRFMTLAMVDGTALVICL-LALPLVSVPSLEVGGYIL 65
           A+ L +++A +HA + A+ +     +++   +D +  ++ + LAL +V  P   +     
Sbjct: 18  ALVLAVLAAVLHAVFGALQKGRYDPWLSRGAIDFSYGMMAMPLALFVVPWPEPHMWPIFA 77

Query: 66  VSVVLNTVYRLFLIKAYETGDFGQVYPVMRGVPPVLVALFSYFLLHEQLSVQALVGVSLI 125
               ++ +Y++    AY  G +  VYPV+RG  P+   + +  L  E+ +    +GV+++
Sbjct: 78  AVWGIHVLYKILQGLAYSKGSYTVVYPVVRGTGPLFTVIGATVLFDERFTAIQWLGVAVL 137

Query: 126 CVGIISLTFV--RRMTAQ---MFKPILMAVCAGAFIASYTVVDAKGVRTSETVLQYIVYL 180
             GI  L     R +T+    +   + +AV  G F+A YT  DA G+R +     ++ + 
Sbjct: 138 LAGIFGLALYNFRNLTSNRETLGSALALAVVTGVFVALYTTYDAYGIRATADPFTFLAWF 197

Query: 181 TVFQSIPIPLLAFSKERSALAQAIRGHWRV-GLLGGVFYLASYALVLFALSLDAVAKVSA 239
                + +P  A+ + R+ + +   G     GLLGGV    S+  V+ A  LD V + + 
Sbjct: 198 FFIDGLAMPPYAYMRWRAMVPRPDPGPLMAKGLLGGVIAFGSFGAVMLATRLDKVGEAAV 257

Query: 240 LRETSVIIGAIIAALFFHERFGWRRMLSAFVIVSGIILIKV 280
           LRETS +  A+I  L   E  G RR+    +I  G +++++
Sbjct: 258 LRETSTVFAALIGWLVLKETVGPRRIALMALIALGAVIVEM 298