Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  141 bits (355), Expect = 2e-38
 Identities = 94/297 (31%), Positives = 149/297 (50%), Gaps = 7/297 (2%)

Query: 1   MAQRPPPTPMLQAFVSAAQAGSFARAASDLNLTASAISHQIAGLEEWWGVQLFERHSRGV 60
           M++R PP   L+ F +AA+  SF RAA +L +T +A+SHQI  LEE+ G++LF R +R +
Sbjct: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60

Query: 61  KLTPAGQA-LLPVTDGFFKALDGVLQSLNPGKSRPLYLSCTSSLCSTWLIPRMHGSHTEA 119
            LT  GQ+  L + D F    +   + L   +   L +S   S    WL+PR+     + 
Sbjct: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRL-ADFNQQ 119

Query: 120 SFNLDLVLTSADMNSTSLEAHQYDVAVVMGYGDYPDHHVELLMCDAVFPVCSPE-FLRLK 178
             ++D+ + + DM+  SL     DVA+  G G +P    + L  + + P+CSP   L  K
Sbjct: 120 EPDIDVRIKAVDMDEGSL-TDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNK 178

Query: 179 GDISLEDVARYPLIHRVDDQVCPGWESWFAFQGLAAPPYHHGPRFPDSSLAISLAVKGTG 238
               L D+A + L+H   D     W+ +    GL     +HGP F  S++ +  A  G G
Sbjct: 179 PMEKLSDLAYHTLLH---DTSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQG 235

Query: 239 IALGRTALVYDLLADGALVALKSPVMMSPAAYYIICQNGRQLEPDIARLIEWLKTSA 295
           +ALG   L    +  G L+A    V+M+  A+Y++C   +     IA   +W+   A
Sbjct: 236 VALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKA 292