Pairwise Alignments

Query, 286 a.a., RpiR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 278 a.a., MurR/RpiR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 5/259 (1%)

Query: 2   DILYQIRARQDAFSAGEGRIAKLMLNDVGFAASASLEELSQRAEVSTATLSRFARSVGCR 61
           +++ ++R+  +  S     +A  +L +       ++ +L+   + S AT+ R  R +G +
Sbjct: 6   NLMVRLRSNTEPLSKKLRVVADYVLENAHEVQYQTITDLAFNTKTSEATVVRLCRDLGYK 65

Query: 62  DLRDLRLQLAQASGVGSRFLDPAGLPEQSAFHRQILGDIEATLRQHLSGFNQASFVDAVS 121
              D R+ LA      +    P    +      Q   D   +L       ++A+      
Sbjct: 66  GYSDFRMALAVDLSQSANQSQPKMDGDICEVSAQSAVD---SLMDTAKLIDRAALNRICE 122

Query: 122 LLGKARMIHAFGMGGPSSLCSDELQVRLVRLGYPIAACHDPVMMRVTAATLGPEHALIVC 181
           L+  A+ I   G+G  SS+    L  RLVR+G       D  +  ++A       A    
Sbjct: 123 LVHGAKFIGCVGVGA-SSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQSVVGDAWFAI 181

Query: 182 SLTGLTPELLDVVTLARNYDARIVAIT-LADSPLAQLADVLLPLQPAETSFIYKPTAARY 240
           S +G T E++   T A      +V++T ++ SPL+ ++D +L     E        +++ 
Sbjct: 182 SSSGSTKEVVHAATQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGGAFSSKV 241

Query: 241 GLLLAIDLLATELALALPD 259
           G LL +D+L   L    P+
Sbjct: 242 GALLLVDVLINTLLDVYPE 260