Pairwise Alignments

Query, 322 a.a., octaprenyl-diphosphate synthase from Pseudomonas simiae WCS417

Subject, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 16/231 (6%)

Query: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDV--VDMSGMRRGRETAN 100
           GGKR RP LV + G+ LG E  DL   A+ +E +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 41  GGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCH 100

Query: 101 AMWGNAPSVLVGDFLYSRSFEMMV--------ELGSMPVMKILSQAT--RIIAEGEVLQL 150
             +  A ++L GD L + +F ++         E   + +++ L++A+  + +  G+ L L
Sbjct: 101 IQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDL 160

Query: 151 SKVRDASTTEETYMEVI-RGKTAMLFEASTHSAAALCGATAE-QAEALRTFGDHLGVAFQ 208
           +      + EE  +E I R KT  L   +    A   G         L  + + +G+AFQ
Sbjct: 161 AAENRLISLEE--LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQ 218

Query: 209 LVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYTMREGTPEQAALVRKAI 259
           + DD+LD   D ETLGK  G D    K T P +  +     +   L+++A+
Sbjct: 219 VQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQEAL 269