Pairwise Alignments

Query, 479 a.a., channel protein TolC from Pseudomonas simiae WCS417

Subject, 491 a.a., outer membrane protein from Dechlorosoma suillum PS

 Score =  122 bits (305), Expect = 4e-32
 Identities = 111/428 (25%), Positives = 191/428 (44%), Gaps = 21/428 (4%)

Query: 23  EAPLSANTDLVSVYQEAVDNNADLAAARAQYGAQKEVVPQARAGLLPNLTGGADINNVRT 82
           E P+S    L  V + A+ +N       A   AQ  +V  A+A  LP L+  A  +  R 
Sbjct: 60  EQPVSGALSLTEVVERALCHNPQTREVWANARAQAALVGVAQAAYLPGLSLSAGQSRNRN 119

Query: 83  QIDTPAATANRDAHSWRATLSQPLFR-ADRWFQLQAAEATNEQAALQLSATEQNLILQSA 141
               P +   ++A     TLS  LF    R   L+ A      AA    +T Q + L + 
Sbjct: 120 DSRKPESYTQKNAG---LTLSYLLFDFGARAATLENARQLLAAAAATQDSTVQAVFLAAL 176

Query: 142 ENYFAVLRAQDNLASTKAEENAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTARANRIL 201
           + Y+ V   +  L + +  E A     + ++ R+ VG +   D LQ+Q +Y  A   RI 
Sbjct: 177 QAYYQVQATEAALVAARESERASLESFNAADARYKVGTATPADRLQAQTAYSQASLKRIQ 236

Query: 202 AQRQVEDAFEALITLTNRQYNSIQGIVHTLPVLPPLPN---DAKAWVETAGRQNLNLLAS 258
           A R  ++A   L  +   + +    +V   PV+ P      D  A V  A R+  +L+A+
Sbjct: 237 ADRDFKNAQGTLANVIGGEAHRPPALVPATPVVAPTREFTADVDALVAEARRRRPDLVAA 296

Query: 259 NYAVTAAEETLKQRKAGHAPTLDAVAQYEKGDNDALGFSNPNAFGTPYRGDVEQRTIGLR 318
                AA+  ++  +A   PTL   A     D   LG +  N             +IG+ 
Sbjct: 297 EAQYQAAQANVEAARAAGLPTLSLTAGPAYQD---LGGNVSNT-----------SSIGVT 342

Query: 319 LSIPIYSGGLTSSQVRESYSRLGQTEQQREGLRRQVVENTRNLHRAVNTDVEQVQARRQS 378
           L++P+++G  T+ +VR + S     E QRE +R+QV  +    ++ + T  + +Q     
Sbjct: 343 LNVPLFTGFSTTYKVRNAESLKEAREAQRERIRQQVALDVWKAYQGLITAGQSLQTTADL 402

Query: 379 IISNQSAVEATEIGYQVGTRNIVDVLDSQRQLYASVRNYNNSRYDYILDNLRLKQAAGTL 438
           ++S ++A +     Y+ G  +I+DVL++Q  L A+ +    + +++ +    L Q+ G L
Sbjct: 403 LVSAEAAEKVALGRYKAGLGSILDVLNAQSALAAARQQRVQATFEWNVSRATLAQSMGNL 462

Query: 439 NPGDLQDL 446
           +   LQ L
Sbjct: 463 DISLLQSL 470