Pairwise Alignments

Query, 425 a.a., 3-deoxy-D-manno-octulosonic acid transferase from Pseudomonas simiae WCS417

Subject, 420 a.a., 3-deoxy-D-manno-octulosonic-acid (KDO) transferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  368 bits (944), Expect = e-106
 Identities = 199/416 (47%), Positives = 261/416 (62%), Gaps = 4/416 (0%)

Query: 1   MNRTLYSCLFYLALPLVALRLWLRARKAPAYAKRVGERFSYGLPVMQPGGIWVHAVSVGE 60
           M R LYS L YL  PL+ L L  RA K+P Y  R GERF  GL  + P  I +H+VS+GE
Sbjct: 1   MARLLYSVLLYLLSPLLVLYLAQRAIKSPDYRGRWGERF--GLKALMPTDILIHSVSMGE 58

Query: 61  SIAAAPMVRGLLARYPTLPITVTCMTPTGSERIQALFANEPRIQHCYLPYDLPCAAKRFL 120
           ++AA P++R ++A  P L ITVT  +PTGS  +   F +  R+QHCYLP+DL  A  RFL
Sbjct: 59  TLAAIPLIRAIMAARPNLRITVTTSSPTGSAEVIKAFGD--RVQHCYLPFDLGFAVNRFL 116

Query: 121 DRVQPKLAVIMETELWPNHIHACAQRGIPVALANARLSARSAKGYARFAKLTAPMLSQMS 180
            ++     +IMETELWPN I     RGI V+L NARLS +SA  Y +FA LT PML  + 
Sbjct: 117 SQLGCAELIIMETELWPNLIAGARARGIKVSLLNARLSEKSAASYQKFASLTVPMLRSLD 176

Query: 181 LFAVQTQTEAQRFLSLGARPETVEVTGSIKFDLTIDPELPARAAALRAQWGASERPVWIA 240
             AVQT  EA+RF++LG     V V GS+KFD+ I P     A  LR  WG  +  +W+A
Sbjct: 177 QIAVQTTKEAERFVALGVDASRVHVCGSLKFDIQIPPSRRESARQLRQSWGRDDHLIWVA 236

Query: 241 ASTHEGEDDVVLAAHRQLLDSYPNALLILVPRHQERFGPMFERCQQQGFATVRRSSGDAV 300
            S H GE D +L+AH QLL+ +P+ALLI+VPRH E+F       +++G     RS G+A 
Sbjct: 237 GSVHPGEFDTMLSAHHQLLEQFPDALLIMVPRHPEQFANAARAIRERGLQLAVRSMGEAP 296

Query: 301 TAQTAVLLGDTMGELLFLYALADSAFVGGSLVATGGHNPLEPAALALPVIMGPHVFNFLE 360
           T  T VLLGDTMGELL  Y  AD AFVGG+LV  GGHNPLEPAA+ LPV MGP+ ++F E
Sbjct: 297 TVGTQVLLGDTMGELLTWYGAADLAFVGGTLVVNGGHNPLEPAAMGLPVAMGPNHWDFKE 356

Query: 361 ITAMMREAGALREVDDAEGLAEAVRQLFELPQDARKMAQAGLKVMQANQGALKRLL 416
           IT ++++AG L      +   + +    +         +AGL+V+++N+GAL R L
Sbjct: 357 ITELLQQAGNLTLCATPDAFNDWLLATAQDSVGRLTAGEAGLRVVESNRGALSRQL 412