Pairwise Alignments

Query, 316 a.a., MerR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 265 a.a., helix-turn-helix-type transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (254), Expect = 1e-26
 Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 12/190 (6%)

Query: 25  IREVARLTGVNPVTLRAWERRYGLIQPIRTESGHRLYSRTDIDTVHRILDWIERGVAVSK 84
           IREVA +TGV PVTLRAW+RRY L+QP RTE GHRL++  DI+ + +I  W+ +GVA+ K
Sbjct: 10  IREVAEITGVKPVTLRAWQRRYNLVQPDRTEKGHRLFTDQDIEMIRQIQSWLAKGVAIGK 69

Query: 85  VGRILARGEPLREPGTVSEDGVEWAQWHGQLRNAISAFDDCQLDRLYGQIFSAYPLAVVF 144
           VG +L  G    E        +E  +    L  A++A    + +++   +   YPL+V+ 
Sbjct: 70  VGALLQSGVSESESIPQPVGQLEECE---TLLTALAALQRSKAEQIIATVLKEYPLSVMQ 126

Query: 145 QDILMPLWQELLRHQGRFGQASEWLFFDNFLRSRTAQRLQVLAAAPLPRVLLAAIAGECR 204
              + P+ + L R +G        LF     R+    +L  +  A       AA+ G+C 
Sbjct: 127 AQFVQPVTEALERVKGPLRSLQIGLF-----RTLMLSKLAFILDAENK----AAVKGKCL 177

Query: 205 ELEVLVAGLL 214
            + +  AG L
Sbjct: 178 CISLDEAGSL 187